Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3748 ATGGACCCCAAGTTCGTCGGAAAGCCGCCGATGACGGTGGACCTCGAGCAGATGCCTGACGCCCCACAGCGTGGGTCCCACCACCGTAGGGCCCACTCCGATACCTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTTTTCGACCCTTCCGACCTCGATATCTCCAACCTCCCTTCGCCGGCGTTGCCCAACTCCTCCACCGGCGGCAACAACGCCTCGCCTTTCTCCGCCGCCGCAGCACAAAACAGCGGCGGCGTGCCTGCAGCCATGGATTTTGTCTCAAAGCCGCCGTCGGAGGAATCTAACGGCGGCGGCGGGAATTCACGTTCGAGGCCGGCGGGTTCCCCTGTCGGCCATATCCGGAGCTTGTCCATGGACTCTGATTTTTTCAACGGCCTGGGATTGACTGGTGGCGTTGATGGAGACAAATTTGGCGGGAAAGGTGCAGAGGAGATAAGGGTGGGTCATCACCGGCACAGCAATTCCATGGATGGGTCATCGTCGATGTGTTTCGAGGCCGACTCTTCCATGGCTATTGACGGCGTGAAGAAGGCCATGGCTCCCGAGAAGCTCGCTGAACTAGCTCTCGTTGACCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGGAAAATTCGGTACACAAATGAACTGGAGAGGAAGGTACAGACGCTTCAAAGTGAAGCAACTAACCTCTCAGCTCAGGTTACTATGCTTCAGAGAGACACTACAGGGTTGACCACTGAGAATAAGGAGCTTAAACTGCGCTTAGAGGCTATGGAACAACAAGCACATCTTAGAGATGCGCTCAATGAAGCATTGAAGGAAGAACTGCAGCGGCTGAAGGTACAAAGTAGTCAGATGGCTGCCATGAATGGGAACCCTTCATATGGCGGGTTTCTCTCTCAATTTGCTTCCCAGTTAGCATTGCAACATCTTGCTAATCCTCCGTCCCAGCAGCCTCAACAGCAATCACAGGTCTCTCCCTCTGATCAGCCTTTCAACGGCCAGCCCGGCCCCGACTTCTTGGATTTCAATGGCAAGAACTAG 1077 0.5497 MDPKFVGKPPMTVDLEQMPDAPQRGSHHRRAHSDTSFRIANFDELLLFDPSDLDISNLPSPALPNSSTGGNNASPFSAAAAQNSGGVPAAMDFVSKPPSEESNGGGGNSRSRPAGSPVGHIRSLSMDSDFFNGLGLTGGVDGDKFGGKGAEEIRVGHHRHSNSMDGSSSMCFEADSSMAIDGVKKAMAPEKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQSEATNLSAQVTMLQRDTTGLTTENKELKLRLEAMEQQAHLRDALNEALKEELQRLKVQSSQMAAMNGNPSYGGFLSQFASQLALQHLANPPSQQPQQQSQVSPSDQPFNGQPGPDFLDFNGKN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3748 358 CDD bZIP_plant_RF2 202 251 IPR044759 GO:0003700|GO:0006355
Alju02g3748 358 MobiDBLite consensus disorder prediction 59 121 - -
Alju02g3748 358 Coils Coil 276 300 - -
Alju02g3748 358 MobiDBLite consensus disorder prediction 320 344 - -
Alju02g3748 358 MobiDBLite consensus disorder prediction 1 32 - -
Alju02g3748 358 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 337 - -
Alju02g3748 358 Coils Coil 224 272 - -
Alju02g3748 358 MobiDBLite consensus disorder prediction 59 81 - -
Alju02g3748 358 MobiDBLite consensus disorder prediction 320 358 - -
Alju02g3748 358 Pfam Basic region leucine zipper 199 250 IPR004827 GO:0003700|GO:0006355
Alju02g3748 358 Gene3D - 200 253 - -
Alju02g3748 358 FunFam Transcription factor VIP1 200 253 - -
Alju02g3748 358 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Alju02g3748 358 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 262 IPR004827 GO:0003700|GO:0006355
Alju02g3748 358 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3748 Alju-ChrAlju02 56476887 56480031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3748 9 357 bZIP Transcription Factor Family AT1G43700 48.098 1.37e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju02g3748 bZIP_2 2.5e-07 CL0018