Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3739 ATGCTGGGGGACTCAACCGCGTTAGGAGGTGGCGGAGCTAGCTCTGGAGATGATGCGGCGGCGGCGGCTGCTACTGCTGCATCTGCGGGAGGTGGAGTTGCAGAGGCCCATGACGGTGGTGAGTCAGCAGTTGCGGCGGAGGGCGGCGGTGGTGGAGGAGGTGGATCGAATTCAGGCGAAGAGGGTGGTGGCGGTGACAGAAGCTTCGGCGGCAACCGGTGGCCCCGCCAGGAGACACTGGCGCTCTTGAAGATACGCTCCGATATGGACGTGGCGTTTCGAGATGCCAGCGTTAAAGGTCCCTTGTGGGATGAGGTTTCCAGGAAGCTAGCAGAGCTTGGATATCACAGAAGTGCCAAGAAGTGTAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGCGAACCAAAGAAGGCCGAACCGGAAAACCATACGGCAAAACGTACCGTTTCTTCGATCAGTTAGAAGCTCTCCATCATCATCATCATCAAAATCAAAACCACCCTCTTCATCATCAAAATACTAATTCTTTATTCATTCAATCCTCTTCTAATTCTGCTCCTCTACCTGCACCACCCGTCTCCGTCATCCCCACCACCCATCCTCCTCCTTCAGTCATGGTGCCGCCGCAAGTAACGCCACCACCTCCTCCTTCGCAGCCTCATGTTAATGCTGCTGCTGCTACCACTGTTCCATCAATGAACACTACTACTTCAATCCCTCCATTGTACCCACCACCACCAGCATCAACAACGATAACAGCAAACCCTACTTTCATACCCTCGTTCACGAGCATTCCGACGGATCTATTGTCAAATTCTAGTTCGTCTTCGACGTCGTCGGATGAGACAATAGAGGCACGGCGGCGGCGGAAGAGGAAGTGGAAGGACTTCTTCGAGAGGTTGATGAAGGAGGTGATAGAGAAGCAGGAAGAGCTTCAGAAGAGGTTTCTGGAAGCCATAGAGAAACGCGAGCACGAGAGAATGGTTAGAGAGGAATCATGGAGAATGCAGGAGATGGCCAGGATCAATAAAGAGAGAGAAATTTTGGCTCAAGAAAGATCCATTGCCGCCGCCAAAGACGCCGCTGTAATGGCCTTCTTGCAGAAGATCGCTGAACAACAGCAGAATCCCGGCCAACCGACACCGACCACAAACACCATTACCATCCCTAATCCTCCTCCTCCGACGTCGCAGCCCACTGCAGCTCCAGCCGCACCAGAACCTGTAATTGCACCGCCGCCGCCTCAAACTGTGACGGTGCAACAATCAACTCCAGTTCTCTCTACTCTTCCAGCGCCCGCTCCGCAGCAACAAGGTATGACGAGCATGGAAATTGTGACGAAGAATGACAACGGAGATAACAGTTATTTGGCAGCGACAACAACGCCGGGTACGCCATCGTCGAGGTGGCCGAAAGAGGAGGTAGAGACGCTGATAAAACTACGGGCAGACCTTGAAGCCAAGTACCAGGAGAATGGGCCGAAGGGGCCGTTATGGGAGGAAATCTCCGCCGCAATGAGGAGGCTGGGTTACAACCGTAGCTCAAAGAGGTGTAAGGAAAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAGAAGGCCAGAAGATTCCAAGACGTGTCCATACTTTCACCAGCTGGATGCTCTATACAGGGAGAAGAGTTTCAAGATGCAGTCAGCGCCGCGGCCGCCGCCGGAGAACATGATGTCTAGTCCACCGCTCATGGTGCGCCCAGAGCAGCAGTGGCCGCCGCAGCCTCAGCCACTGCAGCAGCCGCAGCAAGATACACAGCCGCCGCAGGTGATGATGGGAAGCGCGGGAAATGATGCGATGGAAGAAGACGAAGAAGAGGAAGACAGGGATAGAGAGGAAGAGGATGATGACGATGATGATGGAGGAAATGGTACCTACGAGATAGTGGCAAGCAAGCCAGCTACTTCAGTGGGTGCTTCTGAGTGA 1980 0.5338 MLGDSTALGGGGASSGDDAAAAAATAASAGGGVAEAHDGGESAVAAEGGGGGGGGSNSGEEGGGGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKPYGKTYRFFDQLEALHHHHHQNQNHPLHHQNTNSLFIQSSSNSAPLPAPPVSVIPTTHPPPSVMVPPQVTPPPPPSQPHVNAAAATTVPSMNTTTSIPPLYPPPPASTTITANPTFIPSFTSIPTDLLSNSSSSSTSSDETIEARRRRKRKWKDFFERLMKEVIEKQEELQKRFLEAIEKREHERMVREESWRMQEMARINKEREILAQERSIAAAKDAAVMAFLQKIAEQQQNPGQPTPTTNTITIPNPPPPTSQPTAAPAAPEPVIAPPPPQTVTVQQSTPVLSTLPAPAPQQQGMTSMEIVTKNDNGDNSYLAATTTPGTPSSRWPKEEVETLIKLRADLEAKYQENGPKGPLWEEISAAMRRLGYNRSSKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKSFKMQSAPRPPPENMMSSPPLMVRPEQQWPPQPQPLQQPQQDTQPPQVMMGSAGNDAMEEDEEEEDRDREEEDDDDDDGGNGTYEIVASKPATSVGASE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3739 659 MobiDBLite consensus disorder prediction 448 472 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 375 421 - -
Alju02g3739 659 CDD GT1 72 137 - -
Alju02g3739 659 FunFam Trihelix transcription factor GT-2 74 135 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 448 469 - -
Alju02g3739 659 SUPERFAMILY Homeodomain-like 466 537 IPR009057 -
Alju02g3739 659 MobiDBLite consensus disorder prediction 387 420 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 1 73 - -
Alju02g3739 659 Gene3D - 74 135 - -
Alju02g3739 659 Gene3D - 471 532 - -
Alju02g3739 659 Pfam Myb/SANT-like DNA-binding domain 469 556 IPR044822 -
Alju02g3739 659 Pfam Myb/SANT-like DNA-binding domain 72 158 IPR044822 -
Alju02g3739 659 ProSiteProfiles Myb-like domain profile. 72 130 IPR001005 -
Alju02g3739 659 FunFam Trihelix transcription factor GT-2 471 532 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 560 659 - -
Alju02g3739 659 PANTHER FI21293P1 42 608 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 270 290 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 616 641 - -
Alju02g3739 659 ProSiteProfiles Myb-like domain profile. 463 527 IPR001005 -
Alju02g3739 659 CDD GT1 469 534 - -
Alju02g3739 659 SMART sant 467 529 IPR001005 -
Alju02g3739 659 SMART sant 70 132 IPR001005 -
Alju02g3739 659 Coils Coil 615 635 - -
Alju02g3739 659 Coils Coil 296 323 - -
Alju02g3739 659 MobiDBLite consensus disorder prediction 572 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3739 Alju-ChrAlju02 56401139 56403984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3739 66 607 Trihelix Transcription Factor Family AT1G76880 47.359 3.35e-139 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g3739 Myb_DNA-bind_4 4.2e-23 CL0123