Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3738 ATGCAACTGGGAGATCCAAGTGTGTTAGAGACCTCCTCTGGCGAGCCCATGATGGCCACCGTGACGGTGACTGCGCCACCAACAGAAGCCGCGGCCGCCGACGGTGCTGCAGAAATCGAGATGATGGACAGTATCGTTGGTCTGGATGCAACAAACTCAGGTGATGATATTGATCAGAAGAGAAGTGGCGGCGGCGGCGGCGGCGGTGGAGGAGGAGGCGGTGGCAACCGGTGGCCTCGCCAAGAAACCTTTGCTCTCTTGAAGATAAGGTCAGATATGGACGGTGCGTTTCGGGATTCCAGTCTTAAAGGTCCACTTTGGGAACAAGTTTCAAGGAAAATGGCAGAACTTGGATATAATCGAAACGCAAAGAAATGCAAAGAGAAGTTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAAGCAGAAGTGGTAAACCAGAAGGCAAAACCTACAAATTCTTTGATCAATTACAAGCCCTTGAAAATAAATTCACTGTCTCTCACCATCATCATCACACTCCGTCAAAACCACCGCCGCCTCCGCCTCCGCCTCCGCCACAATCTCAACCTTCTGTCCAAACATGGCCTAGCAATATTAATAATAATGATCCTACTCCTACAGCTACTATCTCTTACGTCACTACTATTCCATCCAATATAAACCCTACTCTCATTTCTCCGCTGCCGCTGGCGCCACAGCCGGTGAATATTGTTGCTGCCACCGTCACCAACCCTAGGAATTTGTCGAACAAAAGCCTTTTCTCTTCAATCACGACAACCACGTCGACCTCGTCGTCGACGGCATCTGATGAGGACATGGAAGAGAAGTACAGGAAGAAGCGGAAGATGAAGGACTACTTTCGGAGGCTGACGAGGCAAGTGCTGGCGAAGCAGGAGGAGATGCAGAAGAAGTTTCTAGAAGCCATAGAAAAGAGAGAGCGTGAGAGAGAAGCACAGTTAGAAGCTTGGAGAGCTCAAGAAATGGCAAGAATCACTAGAGAACATGACATTCTTGTCCAAGAAAGATCCACCGCCGCGGCCAAGGACGCTGCCGTCATCGCCTTCCTCCAGAAGTTATCCGGCGGCCAGCAAAATCCTGCACCGCCGCCACCACCTCCTCCGGCTCCACCACAACAACCTGTAATGCAAGCAGTAGAACAACCTCGTGAACAACTGCAATTGCTGCCTATTGAAAACAAGTTCGAAATACAGAAAGCGAACATAACCAACGGTCATCATAGTAACAATAATAATCCGGTGAGTGTTTCTAATTCTTCTTATTCTTCAAGGTGGCCAAAGACAGAAGTTCATGCATTGATAAGGCTGAGGACAAGTATGGACCCAAAGTATCAAGAGAATGGACCAAAAGGACCATTGTGGGAGGACATATCGGCCGGAATGCAACGGCTAGGGTACAACCGGAGCGCGAAAAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAACGGCGTGAAGATAGCAAGACTTGTCCTTATTTTCAAGAGCTTGAGGCTCTTTACAAGGAGAAAAGCAAAACCAACAACAGTAGTAGTATGAATATCATATTCGGTGGCACGGCCGCCGGGAATCACGAAATGATGATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCACCTCCGCCACATGTGGAGGAGGATGGTGGTGGTGCTGGGAGGGAGAATAACAATGCAAATGATGTTATGTTTCAGTACGAAGAGAAAGAAAGAGACGGAGAAGAAGATCTAGAGGAGATGGAAGAAGAAGATGATGATGATGATGTTGAGGACGAAGAAGAAGATAGTATGGAAGATAATGATCAACAAGAAGGACGTTATGAGGTTGCAGTGACAAGTAATAATAAAATTGCTTCAGTGGATCCTGTTGAATGA 1935 0.478 MQLGDPSVLETSSGEPMMATVTVTAPPTEAAAADGAAEIEMMDSIVGLDATNSGDDIDQKRSGGGGGGGGGGGGGNRWPRQETFALLKIRSDMDGAFRDSSLKGPLWEQVSRKMAELGYNRNAKKCKEKFENVYKYHKRTKESRSGKPEGKTYKFFDQLQALENKFTVSHHHHHTPSKPPPPPPPPPPQSQPSVQTWPSNINNNDPTPTATISYVTTIPSNINPTLISPLPLAPQPVNIVAATVTNPRNLSNKSLFSSITTTTSTSSSTASDEDMEEKYRKKRKMKDYFRRLTRQVLAKQEEMQKKFLEAIEKREREREAQLEAWRAQEMARITREHDILVQERSTAAAKDAAVIAFLQKLSGGQQNPAPPPPPPPAPPQQPVMQAVEQPREQLQLLPIENKFEIQKANITNGHHSNNNNPVSVSNSSYSSRWPKTEVHALIRLRTSMDPKYQENGPKGPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFQELEALYKEKSKTNNSSSMNIIFGGTAAGNHEMMMEPLMVQPEQQWRPPPPHVEEDGGGAGRENNNANDVMFQYEEKERDGEEDLEEMEEEDDDDDVEDEEEDSMEDNDQQEGRYEVAVTSNNKIASVDPVE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3738 644 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g3738 644 CDD GT1 76 141 - -
Alju02g3738 644 ProSiteProfiles Myb-like domain profile. 425 489 IPR001005 -
Alju02g3738 644 FunFam Trihelix transcription factor GT-2 78 139 - -
Alju02g3738 644 Pfam Myb/SANT-like DNA-binding domain 431 518 IPR044822 -
Alju02g3738 644 Pfam Myb/SANT-like DNA-binding domain 76 162 IPR044822 -
Alju02g3738 644 SMART sant 429 491 IPR001005 -
Alju02g3738 644 SMART sant 74 136 IPR001005 -
Alju02g3738 644 Coils Coil 297 328 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 626 644 - -
Alju02g3738 644 Gene3D - 78 139 - -
Alju02g3738 644 Gene3D - 433 494 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 1 19 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 410 430 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 366 383 - -
Alju02g3738 644 PANTHER FI21293P1 52 571 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 178 193 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 555 644 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 168 212 - -
Alju02g3738 644 FunFam Trihelix transcription factor GT-2 433 494 - -
Alju02g3738 644 CDD GT1 432 496 - -
Alju02g3738 644 ProSiteProfiles Myb-like domain profile. 76 134 IPR001005 -
Alju02g3738 644 MobiDBLite consensus disorder prediction 591 621 - -
Alju02g3738 644 Coils Coil 583 603 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 194 212 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 362 388 - -
Alju02g3738 644 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3738 Alju-ChrAlju02 56387724 56390391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3738 72 558 Trihelix Transcription Factor Family AT1G76880 51.093 2.61e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g3738 Myb_DNA-bind_4 1.3e-21 CL0123