Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3694 ATGGCTTCCGATCTCGAAGCCAAAGCCAAAGAGGCTTTCGTCGATGACCACTACGAGCTGGCCGTAGACCTCCTCACTCAGGCCATCGCCATCAGCCCTAGCGCCGACCTCTATGCCGACCGTGCTCAGGCTAACATCAAACTCGGCAACTACACTGAAGCTGTTGCTGACGCGAACAAGGCAATTGACTTGAATCATGAACTAGCCAAGGCATATTTACGCAAAGGTACCGCGTGCATGAAGCTTGAGGAATATCAGACTGCTAAAGCAGCTCTGGTGCAGGGTGCTTCATTGGATCAAGGAGATTCAAGATTCATTACTTTGATCAAAGAGTGTGATGATCTTATTGTTGCAGAGGAAAGCAAACCCATTAATATACATGAAAAGAGCCCTATCTCTAATGTTGCTTCAAAAAGTATTGAGCTAGAGAACGATCTTGCCTTAAATCCAGAGAATGACCCTTCAAAATGGGTGGCTGAACCAGCAGCTAAGCCTAAATACAGGCATGAATTCTACCAGAAGCCTGATGAAGTTGTTGTAACCATATTTGCAAAGGGAATCCCATGTGATAGAGTTACGGTTGACTTTGGTGAACAAATACTAAGTGTTCGTATTGATGTTCCTGGTGAAGATGAATATAATTTTCAACACCGCTTATTTGGAAAGATAATAACTGCAAGAAGCAGATATGAGGTACTGTCTACCAAAATTGAAATTCGCCTTGCAAAAGCAGAACCTTTACATTGGACTTCTCTTGAATACATTGGGCAAATTTTAGTTCAAAGAACGGTTCCTGCTTCCTCAGGTCAAAGGCCTACGTACCCATCCTCAAAACCAACTAGAGTAGATTGGGATAAACTTGAAGCTCAGGTTAAGAAAGAGGAGAAAGAAGAAAAGCTTGACGGGGATGCGGCGCTGAACAAGTTCTTCCGTGAAATATATCATGATGCAGATGAGGACACAAGAAGAGCAATGAGGAAGTCATTTGTGGAATCTAATGGAACGGTGCTGTCTACAAACTGGAAGGAAGTGGGATCAAAGAAGGTCGAGGGAAGTCCTCCTGATGGCATGGTGCTGAAAAAATGGGAATATTAA 1095 0.4356 MASDLEAKAKEAFVDDHYELAVDLLTQAIAISPSADLYADRAQANIKLGNYTEAVADANKAIDLNHELAKAYLRKGTACMKLEEYQTAKAALVQGASLDQGDSRFITLIKECDDLIVAEESKPINIHEKSPISNVASKSIELENDLALNPENDPSKWVAEPAAKPKYRHEFYQKPDEVVVTIFAKGIPCDRVTVDFGEQILSVRIDVPGEDEYNFQHRLFGKIITARSRYEVLSTKIEIRLAKAEPLHWTSLEYIGQILVQRTVPASSGQRPTYPSSKPTRVDWDKLEAQVKKEEKEEKLDGDAALNKFFREIYHDADEDTRRAMRKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMVLKKWEY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3694 364 Gene3D - 165 254 IPR008978 -
Alju02g3694 364 Gene3D Tetratricopeptide repeat domain 1 123 IPR011990 GO:0005515
Alju02g3694 364 FunFam Protein SGT1 homolog A 162 264 - -
Alju02g3694 364 ProSiteProfiles SGS domain profile. 273 364 IPR007699 -
Alju02g3694 364 PANTHER PROTEIN SGT1 HOMOLOG 1 362 IPR044563 GO:0051087
Alju02g3694 364 ProSiteProfiles TPR repeat profile. 35 68 IPR019734 GO:0005515
Alju02g3694 364 Pfam SGS domain 283 362 IPR007699 -
Alju02g3694 364 ProSiteProfiles CS domain profile. 164 253 IPR007052 -
Alju02g3694 364 Pfam CS domain 168 243 IPR007052 -
Alju02g3694 364 SUPERFAMILY HSP20-like chaperones 163 256 IPR008978 -
Alju02g3694 364 Pfam Tetratricopeptide repeat 35 65 IPR019734 GO:0005515
Alju02g3694 364 Pfam Tetratricopeptide repeat 69 100 IPR019734 GO:0005515
Alju02g3694 364 CDD p23_CS_SGT1_like 170 253 - -
Alju02g3694 364 SMART tpr_5 69 102 IPR019734 GO:0005515
Alju02g3694 364 SMART tpr_5 35 68 IPR019734 GO:0005515
Alju02g3694 364 SUPERFAMILY TPR-like 3 112 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3694 Alju-ChrAlju02 55737836 55742323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3694 1 101 U-box Gene Family AT3G07370 31.373 1.20e-06 47.8