Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3670 ATGGTTTCCAAAAACCCAAACCCCCCGGAGGGCTTCTACTTGGATCCCCCTGGCATGGCGCTTCCTGGCCTTGGTCCCTTCGCTTCCGTCACCACCGCCGCCGCAACTACCACCTCTACTTCCGCCGCTAATTCATCGGACGACCCTTCCAAGAAGATCCGAAAACCGTACACTATAACCAAGTCCAGGGAGAGCTGGAGCGAACCCGAGCACGACAAATTCTTCGAAGCCCTACAACTTTTTGACCGTGACTGGAAGAAGATCGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGTAGCCATGCGCAGAAATATTTTCAAAAAGTTCAGAAGAGTGGAGGAAATGAGCATCTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAAAAATGCTCTGGTACACACTCAAATACCAGGATCCTTTCAGTCTTCATCTCCTCTGGTTGAGCCTGGATATATAATAAAGCCTGATTCCTCTGCAATGATCAAAACTCCAGCTAATAATGCTGCAGTGTCTTGGTCAAACAACACTTTGCAGACGACTAATTTGCTGCATGGGCCCAGAATGAATAATAGTTGCAGTAGCAGTGAGAGCACTCAGAGAGCGCAGCCAATTGGTGTATCTACTGGTCAAGGGAATAATAGCCATCCATTGAGAGTTCTGCCAGACTTTGCACAAGTTTACAAGTTCATTGGCAGTGTATTTGACCCAGAAGTCACTGGGCATCTGCAGAAACTAAAAAAGATGGATCCAATAGATGTTGAGACGGTACTACTATTGATGAGAAACCTGTCTATCAATATAGCAAGCCCAGATTTTGAGGATCATAGAAGGTTGCTCTCTTCTCATGAGGTGGAACTAGGGACAATCTAG 903 0.4618 MVSKNPNPPEGFYLDPPGMALPGLGPFASVTTAAATTTSTSAANSSDDPSKKIRKPYTITKSRESWSEPEHDKFFEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFQKVQKSGGNEHLPPPRPKRKAAHPYPQKASKNALVHTQIPGSFQSSSPLVEPGYIIKPDSSAMIKTPANNAAVSWSNNTLQTTNLLHGPRMNNSCSSSESTQRAQPIGVSTGQGNNSHPLRVLPDFAQVYKFIGSVFDPEVTGHLQKLKKMDPIDVETVLLLMRNLSINIASPDFEDHRRLLSSHEVELGTI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3670 300 MobiDBLite consensus disorder prediction 110 139 - -
Alju02g3670 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 110 IPR006447 GO:0003677
Alju02g3670 300 CDD SANT 65 108 IPR001005 -
Alju02g3670 300 FunFam protein REVEILLE 6 isoform X1 65 113 - -
Alju02g3670 300 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Alju02g3670 300 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Alju02g3670 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Alju02g3670 300 MobiDBLite consensus disorder prediction 194 224 - -
Alju02g3670 300 MobiDBLite consensus disorder prediction 35 56 - -
Alju02g3670 300 Gene3D - 66 113 - -
Alju02g3670 300 PANTHER SWI/SNF COMPLEX-RELATED 33 279 - -
Alju02g3670 300 SMART sant 62 110 IPR001005 -
Alju02g3670 300 ProSiteProfiles SANT domain profile. 61 112 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3670 Alju-ChrAlju02 55459543 55464399 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g3670 Myb_DNA-binding 4.5e-09 CL0123