Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3650 ATGTCATCGCCAGGATTCACGGGTGGTGGAGCACCGGAGTTCTACGGCGGAGTTGGCCGATCCATGGCGGCAACCGCCATGAACGACCCTACCAACACTAACAACCTTCAACCTTCTCTTCATCATCCTCTGTACCGAATCCAGCAGCAGCAGCAACAACAACAACCAGCAATTTTTCTGGATCCTTACACGCAGATCGCAAGGCAAAATCCGAGTCTCATCGGGAAGCGAACCCTCGCAGAATTTCAAACTCATCAACAGAATCACAACAATCAGGTTCTCTCAAGCCTCCTTTTACGCTCTGTAAAGCCCAGAACCTTCCAGAATAGCTCTCCTCTGTCTCCGATGTCACCCATGGATTTCTCCATGTCCCCTGAATTGCCAAACCCTTCGGTTTTCTCGTCACAGCGATTTGGGTTGCCTTTGCTTCAGCAATCTCGCCCACAGACGATGAATCTCCCAACCACGGCCTTATCCAGAGCTGGATTTCCATATTTGAATGGTAATTTGGTTCAGGAAAGTGAGAAGAAGGTCATGGACCATCGGCTTCAGGAGTTGGAGAAACAGCTTTTGGAAGATAACGACGAGGAAGAAGGCGATGCGGTGTCTGGGATCACCAGCAGCGAGTGGTCAATACAGAATCTGATCAGTCCCTCCGGCGTACAGAAACCAATTTCTTCGTCGCCTACTTCATCTACAACCTCGACGACGTCGTCTTCTTCCTCTGTTCCTTCCCCTGCTTCCACCTGTTTGAAGCAGTCGTTAATGGAGGCCGCATCTGCAATTTCCGAAGGCAAATCCGACTCCGCCTTGGAGATCCTGACCCGTTTGGCCCAGTTATCAAACCCGAACGGCAATTGGGATCAACGACTGATGGATTGTATGGTTTCCGCACTGAAATCTCGTGTGAACCCACAGGAAAACCCACCTCCGTTTAGAGAACTCTTCAGCAGCGAACACGCCGAGTCGACTCAGTTGCTCTACGAATATTCTCCGTGCTTCAAGGTTGGGTTCATGGCGGCCAATCTGGCAATCCTCGAAGCCGCATTCGAGGACACGACGGAGAACAACGGCGGCAACAAGTTACACGTGGTCGATTTTGACATCGGCAGGGGAAAGCAATACATACATCTCCTCCACGAGCTCTCGGCGCGTCAGAATGGAAAACTAGTCACGGTGTACATCACGGCGGTTGCGGAGAACGACAGTGAAGAGAGGTTGAAGATGGTGGGTGATATGTTAAGACAGCAAGCGGAGCAACTCGGAGTCGGATTCGAGTTCAGAGCAATAACCCAACAACTCACCGAGTTAACGCGTGAGTCACTAGGGTGCGAGCCAGGCGAGCCATTGGCAGCGAATTTCGCTTTCAAATTATACAGAATGGCCGACGAAAGCGTTTCCACAGAAAACCCACGAGACGAGCTTCTCCGGCGCGTGAAAGGGTTGGCCCCGCGCGTTGTAACGCTGGTGGAGCAAGAGATAAACACCAATACGGCGCCGTTTACGTCCCGCGTTTCCGAGTCGTTCTCCTATTACGGCGCGCTATTTGATTCGCTCGAGTCAACAATCCCAAGAGACAACTCAGAGCGAGTGAAGCTGGAACAAGGACTGAGTCGAAAGATTAGCAACTCGATCGCGTGCGAAGGAAGAGAACGCGTGGAAAGGTGCGAAGTATTTGGGAAGTGGAAAGCCCGTACAAGCATGGCGGGTTTTCAACTGAAGGGAATGAATCAGAGAATCGCCGAGATGATTAAAGCGCGACTCAACCAGGGGAACCGAGTCAACCCGGGATTCACAGTGAAGGAAGAGAATGGTGGGATTTGCTTTGGTTGGATGGGTCGAACACTCACCGTCGCATCTGCTTGGCGTTAA 1872 0.516 MSSPGFTGGGAPEFYGGVGRSMAATAMNDPTNTNNLQPSLHHPLYRIQQQQQQQQPAIFLDPYTQIARQNPSLIGKRTLAEFQTHQQNHNNQVLSSLLLRSVKPRTFQNSSPLSPMSPMDFSMSPELPNPSVFSSQRFGLPLLQQSRPQTMNLPTTALSRAGFPYLNGNLVQESEKKVMDHRLQELEKQLLEDNDEEEGDAVSGITSSEWSIQNLISPSGVQKPISSSPTSSTTSTTSSSSSVPSPASTCLKQSLMEAASAISEGKSDSALEILTRLAQLSNPNGNWDQRLMDCMVSALKSRVNPQENPPPFRELFSSEHAESTQLLYEYSPCFKVGFMAANLAILEAAFEDTTENNGGNKLHVVDFDIGRGKQYIHLLHELSARQNGKLVTVYITAVAENDSEERLKMVGDMLRQQAEQLGVGFEFRAITQQLTELTRESLGCEPGEPLAANFAFKLYRMADESVSTENPRDELLRRVKGLAPRVVTLVEQEINTNTAPFTSRVSESFSYYGALFDSLESTIPRDNSERVKLEQGLSRKISNSIACEGRERVERCEVFGKWKARTSMAGFQLKGMNQRIAEMIKARLNQGNRVNPGFTVKEENGGICFGWMGRTLTVASAWR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3650 623 ProSiteProfiles GRAS family profile. 242 623 IPR005202 -
Alju02g3650 623 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 216 613 IPR005202 -
Alju02g3650 623 MobiDBLite consensus disorder prediction 219 248 - -
Alju02g3650 623 Pfam GRAS domain family 251 623 IPR005202 -
Alju02g3650 623 Coils Coil 176 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3650 Alju-ChrAlju02 55308057 55309928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3650 48 623 GRAS Transcription Factor Family AT5G52510 50.000 6.16e-171 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g3650 GRAS 1.2e-103 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g3650 02 55308057 55309928 Alju02g3650 02 55308057 55309928 ECH