Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3597 ATGTTTCCTTCACAACAACGAGGCAACAATGAGAGGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCACCACTACCACCACCAGGAAATCTCAGAGGATCTCATTCTGGACGGCCATGCTCATCATCATGCTTCTCTGGACATCATCAATTTTTCCGATAAAAAATTACAAAGTATTAGTACGGGCAAGCTACTTTATGAGTCTTCTGGTGATAAGATTAACCATTATCTAAATTCTGTTAACAAGGACTACAAGAAGAAGAACGAGAAGCTCATTCACAGAGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACTCTCTATGCTTCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGATATCAGATCACATGAATGAAGCGAAGAACTACATAAAGCACCTGCAAAAGAGAATCAAAGAACTGAGTTCCAAGAGAGATGAACTGAAGAAATTAACAGAGAATAATTCTTCGAATCCAGAAGAAACACACGAGTGCGAAAACTACGCATATAGCGGCTTTTTCAGTGTTCACAAGATTAATGACAATGTTGGTGTTGGAATAGAAGTTTCTAGTTCCTTCGGAGAGGAAAGGCTGTTTCCCCTTTCAAAATTACTTAAATTGATACTTGACGAAGGACTTGGAGTTGCTAATTGTGTCACCAGCCAAATCAATGGAAGAATAATTCACAGTGTTCAGTGTGAGGTTACCAACAGTTCCGACGACCGTGTAGACCTACCCGCGCTGAGAAGGAAAATTGTTAATCTAGTCCCATCATTTAAATGTTCTGATTAA 813 0.4084 MFPSQQRGNNERVIEFSSRPHHHHHYHHQEISEDLILDGHAHHHASLDIINFSDKKLQSISTGKLLYESSGDKINHYLNSVNKDYKKKNEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKRIKELSSKRDELKKLTENNSSNPEETHECENYAYSGFFSVHKINDNVGVGIEVSSSFGEERLFPLSKLLKLILDEGLGVANCVTSQINGRIIHSVQCEVTNSSDDRVDLPALRRKIVNLVPSFKCSD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3597 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 156 IPR036638 GO:0046983
Alju02g3597 270 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 75 262 - -
Alju02g3597 270 Coils Coil 131 161 - -
Alju02g3597 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 141 IPR011598 GO:0046983
Alju02g3597 270 Gene3D - 80 174 IPR036638 GO:0046983
Alju02g3597 270 SMART finulus 95 147 IPR011598 GO:0046983
Alju02g3597 270 CDD bHLH_AtORG2_like 90 165 - -
Alju02g3597 270 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Alju02g3597 270 FunFam Transcription factor bHLH126 81 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3597 Alju-ChrAlju02 54638170 54639522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3597 94 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 44.643 1.01e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g3597 HLH 2.3e-09 No_clan