Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3596 ATGGATCTGAAATTTCACAAGAGCAAACAGACAAAGAGTCGGCGGCCAAACCCACCTGTTGGTCTGCAACAAGATTGCGATGATGTTCAAAAGAAACTGATCCGACGGCACACAGAAAGACAAAGGAGGCAAGAAATGGCCGATCTCAGTGCTTCTCTTAGATCCTTACTCCCTCTCGAGTACATCAAGGGAAAGCGATCGGCATCAGATCACTTAAATGAGGCTGCCAAATACATCAAACATCTACAAAATAGGATCGAGGAACTGAATTGTAAGAGGAACAGGCTAAGGATGATGTGCAATTTGAATGTTGATGGCCCTGATATTACAACCTTAACCAAAGCTACAATTCATGACCCACCAACAATTGTTATTACTGTTACTCGAAATGTGGCTGGGGTTGGGGTTGTTCTCAGCACAGCACAAGTGTTGCCTCTTTCAAAAATATTGGATTTACTAGTCAAAGAGGGGTTAAGAGTTGTTAATTGTGTTTCTGATCTAATTGGAATCGAACCATCAGCATTACAAAGAAAACTAGCAGAATCAAGTCCGTCTTCAAGTAATTCTCTTCTATCTAAATGAAACGAACTCGATCGAAAGAAAGGAAGTGGCGAGTCGGGCGCAAGAGTCGGACCTCAGGCGATTGATGAGCGCAAGAGTGAAGCCGAGATCATCAGCGAAATCGCCGCCGGAGTTCCAATAAGTGCGTGCGACGGAGTTCTAGCGACAGAGTTCGAGCGAGGAGAAGGAAATCTGAGAAAGGGAGTTCAATAG 774 0.4432 MDLKFHKSKQTKSRRPNPPVGLQQDCDDVQKKLIRRHTERQRRQEMADLSASLRSLLPLEYIKGKRSASDHLNEAAKYIKHLQNRIEELNCKRNRLRMMCNLNVDGPDITTLTKATIHDPPTIVITVTRNVAGVGVVLSTAQVLPLSKILDLLVKEGLRVVNCVSDLIGIEPSALQRKLAESSPSSSNSLLSKXNELDRKKGSGESGARVGPQAIDERKSEAEIISEIAAGVPISACDGVLATEFERGEGNLRKGVQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3596 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 82 IPR011598 GO:0046983
Alju02g3596 257 Coils Coil 72 99 - -
Alju02g3596 257 Gene3D - 23 105 IPR036638 GO:0046983
Alju02g3596 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 165 - -
Alju02g3596 257 MobiDBLite consensus disorder prediction 185 215 - -
Alju02g3596 257 CDD bHLH_AtORG2_like 31 97 - -
Alju02g3596 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 101 IPR036638 GO:0046983
Alju02g3596 257 MobiDBLite consensus disorder prediction 1 25 - -
Alju02g3596 257 Pfam Helix-loop-helix DNA-binding domain 35 83 IPR011598 GO:0046983
Alju02g3596 257 SMART finulus 36 88 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3596 Alju-ChrAlju02 54627219 54630131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3596 23 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 39.216 8.77e-25 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g3596 HLH 2.5e-08 No_clan