Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3593 ATGATGAACCCGTTACCTCCGTTTGGCGATGATGATTTGTTCTTCCAAATTTCATTTCTGAATAATCGTTCTTCTCTCTCGATCCAAACAATCCCAGAACAAGAGATCTTTCATGATCCTCCTGCAGAAAAAGTGAATAATTTTGGAAGTGAAGAAGTAATACCAAAGGGAAAGGGCAAGCAGAACAAGCAAAACGAATTTCCAGCTAAAATTGCAGATGGTAACAAGAGATGGAGTCATAGAGAGACAGAAAGACAAAGAAGACAAGAAATGGCCACTCTTTGTGCCCTCCTCAGATCGTCTTTGCCTCTCGAATATATCAAGGGAAAGCGATCAGCTTCAGATCACATTGATGGGGCTGTGAAATATATCAAACACCTAAGGAACAAAGTGAAGCAATTGAAGGAAAAGAGAGATGAGTTGATGAAAAATGGACATAGAATCTCTGTTATTGTTCATCCTTACAAGGTTGGATTTGAGATTATGTGCAGTTATAGTTTCAGAGAGTACTTATTTACTCAGTCAAAACTCTTGAGTATTTTGATTAAAGAAGGGTTTAATGTGGTGAGCTGCACTTCTATCAAAAGGCATGAGATGTTCATTCACACAATTCGATTAGAGGAGTCCGATGTTATCTCAGGGAGTATTACTGACTACTCTGAACTGCAAAGAAAGCTTACTGCAGAAATATTATCTACAGAACATAGAGAGACTACTGCATCTGAACCAGAAAACTGCTGA 741 0.3846 MMNPLPPFGDDDLFFQISFLNNRSSLSIQTIPEQEIFHDPPAEKVNNFGSEEVIPKGKGKQNKQNEFPAKIADGNKRWSHRETERQRRQEMATLCALLRSSLPLEYIKGKRSASDHIDGAVKYIKHLRNKVKQLKEKRDELMKNGHRISVIVHPYKVGFEIMCSYSFREYLFTQSKLLSILIKEGFNVVSCTSIKRHEMFIHTIRLEESDVISGSITDYSELQRKLTAEILSTEHRETTASEPENC 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3593 246 CDD bHLH_AtORG2_like 76 143 - -
Alju02g3593 246 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 73 227 - -
Alju02g3593 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Alju02g3593 246 Pfam Helix-loop-helix DNA-binding domain 76 128 IPR011598 GO:0046983
Alju02g3593 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 154 IPR036638 GO:0046983
Alju02g3593 246 Gene3D - 69 153 IPR036638 GO:0046983
Alju02g3593 246 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3593 Alju-ChrAlju02 54601583 54602771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3593 59 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G12540 37.374 6.13e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g3593 HLH 5.3e-09 No_clan