Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3591 ATGATGAACCCGTTGCCTCCATCTGGCGATGAAGATTTGTTCTTCCAAATTTCAGTTCTGAATAATCGTTCTTCTCTCTCGATCCAAACAATCCCAGAACATGAGATCTTTCATGATCCTGCAGAAAAAGTGAATAATTTTGGAAGTGAAGAAGTAATACCAAAGGGAAAGGGCAAGCAAAAGAAGCAAAACGAATTTCCAGCTAAAATTGCAGAAGATGGTAACAAGAAATGGATTCATAGAGAGACAGAAAGACAAAGAAGACAAGAAATGGCCACTCATTGTGCCTCCCTCAGATCGTCTTTGCCTCTCGAATATATCAGGGGAAAGCGATCAGCTTCAGATCACATTGATGGGGCTGTGAAATATATCAAACATCTAAGGAACAAAGTGAAGAAATTGAAGGAAAAGAGAGATGAGTTGATGAAAAATGGACATAGAATCTCTGTTATTGTTCATCCTTACAAGGTTGGAGTTGAGATTATGTGCAGTTATAGTTTCAGAGAGTACTTATTTACTCAGTCAAAACTCTTGAGTATTTTGATTAAAGAAGGGTTTAATGTGGTGAGCTGCACTTCTATCAAAAGGGATGAGATGTTCATTCACACAATTCGATTAGAGGAGTCCGATGTTATCTCAGGGAGTATTACTGACTACTCTGAACTGCAAAGAAAGCTTACTGCAGAAATATTATCTACAGAACATAGAGAGACTTCATCTGAACCAGAAAACTGCTGA 738 0.3808 MMNPLPPSGDEDLFFQISVLNNRSSLSIQTIPEHEIFHDPAEKVNNFGSEEVIPKGKGKQKKQNEFPAKIAEDGNKKWIHRETERQRRQEMATHCASLRSSLPLEYIRGKRSASDHIDGAVKYIKHLRNKVKKLKEKRDELMKNGHRISVIVHPYKVGVEIMCSYSFREYLFTQSKLLSILIKEGFNVVSCTSIKRDEMFIHTIRLEESDVISGSITDYSELQRKLTAEILSTEHRETSSEPENC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3591 245 CDD bHLH_AtORG2_like 76 143 - -
Alju02g3591 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Alju02g3591 245 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 63 227 - -
Alju02g3591 245 Gene3D - 68 153 IPR036638 GO:0046983
Alju02g3591 245 SMART finulus 81 133 IPR011598 GO:0046983
Alju02g3591 245 Pfam Helix-loop-helix DNA-binding domain 79 128 IPR011598 GO:0046983
Alju02g3591 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 154 IPR036638 GO:0046983
Alju02g3591 245 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3591 Alju-ChrAlju02 54579339 54580621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3591 76 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 40.351 5.38e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g3591 HLH 2.9e-08 No_clan