Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3574 ATGTTTTCATTCACGTGTTCTTCATCAGACCCTCATTCGCCGGCTTCGGATTGTGGCAGCGGCAGCGGAGTTCGATCATTGGTTTTGTCCGACGAGGAGGTGTTGTTGGCAGCGAGTCACCCGAAGAAACGCGCCGGGAGGAAGAAGTTCCGGGAGACTCGCCACCCGGTGTACCGCGGTGTTCGGAGGAGGAATTCCGGCAAGTGGGTGTGTGAAGTGCGGGAGCCCAATAAGAAGACGAGAATTTGGCTGGGGACGTTTCCCACGGCGGATATGGCTGCGAGGGCCCACGACGTGGCGGCGATAGCCCTGCGGGGCCGGTCGGCTTGTCTTAACTTTGCTGACTCTTCCTGGCGATTGCCGCTGCCGGCGTCGACTGAGGCGAAGGATATTCAGAAGGCGGCGGCAGAAGCAGCGGAGGCATTCCGTCCGGGGACGGAATCGGAGAGCGACGAATTGAGGCTGGAAAATGCGGAGGCGACGACCAGCTTGGCAGCGGCAGCCGGGGAAGAGCAAAGTATATTCTTAATTGATGAAGAAGCGGTGCCGCGTATGCCGGAGATGGTGAGGAACATGGCGGACGCTGTGCTGATGTCGCCTACTCATAGCTTTGGGGATCAGTATGATGGAGCTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 684 0.5746 MFSFTCSSSDPHSPASDCGSGSGVRSLVLSDEEVLLAASHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSSWRLPLPASTEAKDIQKAAAEAAEAFRPGTESESDELRLENAEATTSLAAAAGEEQSIFLIDEEAVPRMPEMVRNMADAVLMSPTHSFGDQYDGADVEVDDAEVSLWSYSI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3574 227 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 SUPERFAMILY DNA-binding domain 57 116 IPR016177 GO:0003677
Alju02g3574 227 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Alju02g3574 227 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Alju02g3574 227 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Alju02g3574 227 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 225 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3574 Alju-ChrAlju02 54313946 54314629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3574 9 225 AP2-EREBP Transcription Factor Family AT4G25470 57.798 9.12e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g3574 AP2 9.2e-15 CL0081