Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3573 ATGGATAGCAACTTGCCTCCGCCTGAACAATCTTCTGCTTCTTCTTCTTCTTCGCCTTCTTCTGCTGTTGCTCCTTTGGTTTTACAAGTTCCTTCTTCTCATGAGTCGTCTTTATTGTCTCCGAGGACGGCGAGATCGCCGTCGTCTTCGGGTCAGCATACCAGCAGAAGGCACTCCACTTTCCGGGGAATCCGGAGCCGGAGCGGGAAATGGGTGTCGGAGATACGGGAGCCTCGTAAAACCACGCGCATTTGGCTGGGGACGTACCCGACGCCGGAGATGGCCGCCGCGGCGTATGACGTGGCGGCGCTTGCATTGAAAGGGCCTGACACTACCCTCAACTTCCCCAACTTGATCCTCTCTTACCCGATCCCAGCGTCATTGTCGGCCACCGATATTCGGGCTGCAGCATCAGCCGCCGCCGAGGCGAGGCTCGTGAGGTCTACGGAAACAGGTGGACAAGACGCCGGAGGCGAAGGAGGAAACCAAGGCGAGGGCTGGAGCCGGAGCGCAGAAGAAGTTGCGACGACGGAGAAAAGCGAGGAATTTATCGATGAGGACGAACTATTGAATATGCCAAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCACCGTACGCTTCCGATGATTCGCCGCCGAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 699 0.5651 MDSNLPPPEQSSASSSSSPSSAVAPLVLQVPSSHESSLLSPRTARSPSSSGQHTSRRHSTFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSTETGGQDAGGEGGNQGEGWSRSAEEVATTEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPPNSDHGDSLWSF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3573 232 MobiDBLite consensus disorder prediction 148 232 - -
Alju02g3573 232 MobiDBLite consensus disorder prediction 216 232 - -
Alju02g3573 232 FunFam Ethylene-responsive transcription factor 2 59 117 - -
Alju02g3573 232 Pfam AP2 domain 61 108 IPR001471 GO:0003700|GO:0006355
Alju02g3573 232 ProSiteProfiles AP2/ERF domain profile. 60 116 IPR001471 GO:0003700|GO:0006355
Alju02g3573 232 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 231 IPR045277 GO:0003700
Alju02g3573 232 MobiDBLite consensus disorder prediction 1 66 - -
Alju02g3573 232 SMART rav1_2 60 122 IPR001471 GO:0003700|GO:0006355
Alju02g3573 232 MobiDBLite consensus disorder prediction 1 57 - -
Alju02g3573 232 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Alju02g3573 232 CDD AP2 59 118 IPR001471 GO:0003700|GO:0006355
Alju02g3573 232 Gene3D AP2/ERF domain 60 117 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3573 Alju-ChrAlju02 54279724 54280422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3573 55 232 AP2-EREBP Transcription Factor Family AT5G52020 60.894 3.81e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g3573 AP2 2.5e-10 CL0081