Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3570 ATGAAAAGTACAAGTATGAAAATAAAAATTGTCTTTTGGCTGTTGATTATTAATTTTAATCAAAATTATTTGATAATATCAAGGTGGTTTCATTCAGAGACAATGGCTTCTAATTCTCCTCAAGTTGTTGACTGTGCTAGACTCAACATCACTATCTTGCTCGTGGACAATAATACCACCACTCTCTCTGTCAAAGCTGGTTTTCTCAGATCATGGCAATACAAAGTTGCAACTGCTACAAGTGGTCATGAAGCTTTGAAGACTCTAAGGGAATTCAGAGGCTTCTTTGACCTCGTCATCACCGACCTTAACATACGAGGAATTAATGGTTTTGAACTCCAAAAACGTGTCAAACGTGAATTCAATCTTCCAGTCATAATTATGTCTGGAGATGGGAGGAATCTGAAGCATGGAGCATCGTATTGCATTATGAAACCAGTACAAAGAGATGACTTAAAAAATGTGTGGCAGTATGTTGTGGCTGGGAAGAGAGAGAAACTAAGAATTGAGAATGGTAGAATAGTATCAGTAAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGACTCATCACCACCACCAACTGTTAATTCAGCATCGCCTAAAAAGCAAAGGAAGAAGTATTGCAAGAGAAAGCGTAATGAGGTGATTGAGAATGAAGAACTCATATTCTGTGGTCTAAAGAGATCCAAGATTTTCTGGACTACTAATCTTCACAATCGCTTCTTGTTGGCCATAGACTACATTGGCATGGAAAAGAAAGGAATCCTTGAGGGATTATCAGAGAGAGCCTTAAGGTCAAGGTTTGCTATGGGCCTTCCCATAGATCTCATCAGAGACCTTAAAAGGAGAGTTGGTCATTTTCGTGGTCATGAAAATTATTATCAACAACATTACGGTCCCGTTGTGTCTAGGCCTCTAACAACCAGACCCCTTCTCAGCAATCAAACTAGACTGACTCAACCAAACCACCATGAGACTAATCATGCTTACAGAAACTTCCAACAGAATCAAGCAAATCATCATAATCATCACAGCGCAAATGGAGGGTTCATGAATTCAGCAAATGCCCTCACTGCAAATGGTTTGATGAGTAACTATACCTCACTGGGGAATAGCAGAAACTTCAACTATGTCCCAACTAATTATGATAATAAGAACAATCATGGGATGACAAGGCCTTATGGAAGTTTTGGCCTACAACGAACTCCTTGGACATATAATCACCACCATGGAACTCAACTAAATAACAATTATAATAACCATGGGATGATAATGCCTTATGAAAGTTCTGGCTTGCACCGAAGTCCCAGTACTTATAACAGCCACTGTGGAATTCAACTAAACAACAATGCTTCTCTTACATTTGGTGCGTTGAGTCGAGTTCCGTATGTTGGTTATACAGCTCAAAACAACAACAACAACAACATATTTGGCTTGTTAAGTAATGGGAGTGCTTCAAACGATGCATTTGTGCCAATCTCATCCTCATTTGTGAATGTTTGTGTTGAACCAAATCGAGCAAACGTGTCTGCAGGGTTCCCATCTTTGCCTCAGAAGTCAATTAATGGTATTAGGAATGCTGGAGGTGGTAATCATAAGCAACATGATATTGTCACTTCAGCTAATCATTTGGAAGCTGGCCGAATAGATGATCTTGATGAACTTTTCCTAATGCTAAACGACATGGTTCCTCCTGATGATGAGGTCTTCTCCAATCAGACTGAAGAAAGGCCTCATGCTGGTGTACGTTCGACTTCTGACATTCTTAGCTCCTTCAATATTAAAGACTGCATTGAGCTGGGAGATGGTGATCATGTAACCACTCAAACAAACGAAAGAAGCATTAATGTTCTACCGAACAAGTCCTCATCTTGCACCAACGAAAACCCTAATCTGGTGGTGAGGAACGATACATCCACAAACTTGGAACCCATGGACATGTTCATGGCGGACCAGCAGGCTAATTCATCAGCTGGAAACTCAACTCCTCCAGAACAGATCCCAACTAGAAGTAATGACAAAGCTGCTCCTTTCAAGAATCATGAACTTGATGCAAATCTTATATAG 2067 0.4001 MKSTSMKIKIVFWLLIINFNQNYLIISRWFHSETMASNSPQVVDCARLNITILLVDNNTTTLSVKAGFLRSWQYKVATATSGHEALKTLREFRGFFDLVITDLNIRGINGFELQKRVKREFNLPVIIMSGDGRNLKHGASYCIMKPVQRDDLKNVWQYVVAGKREKLRIENGRIVSVSEEEEEEEEGDSSPPPTVNSASPKKQRKKYCKRKRNEVIENEELIFCGLKRSKIFWTTNLHNRFLLAIDYIGMEKKGILEGLSERALRSRFAMGLPIDLIRDLKRRVGHFRGHENYYQQHYGPVVSRPLTTRPLLSNQTRLTQPNHHETNHAYRNFQQNQANHHNHHSANGGFMNSANALTANGLMSNYTSLGNSRNFNYVPTNYDNKNNHGMTRPYGSFGLQRTPWTYNHHHGTQLNNNYNNHGMIMPYESSGLHRSPSTYNSHCGIQLNNNASLTFGALSRVPYVGYTAQNNNNNNIFGLLSNGSASNDAFVPISSSFVNVCVEPNRANVSAGFPSLPQKSINGIRNAGGGNHKQHDIVTSANHLEAGRIDDLDELFLMLNDMVPPDDEVFSNQTEERPHAGVRSTSDILSSFNIKDCIELGDGDHVTTQTNERSINVLPNKSSSCTNENPNLVVRNDTSTNLEPMDMFMADQQANSSAGNSTPPEQIPTRSNDKAAPFKNHELDANLI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3570 688 CDD REC_typeB_ARR-like 52 160 - -
Alju02g3570 688 Pfam Response regulator receiver domain 52 154 IPR001789 GO:0000160
Alju02g3570 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 278 IPR045279 GO:0009736
Alju02g3570 688 SMART REC_2 50 156 IPR001789 GO:0000160
Alju02g3570 688 MobiDBLite consensus disorder prediction 653 669 - -
Alju02g3570 688 MobiDBLite consensus disorder prediction 178 206 - -
Alju02g3570 688 Gene3D - 50 216 - -
Alju02g3570 688 SUPERFAMILY CheY-like 50 164 IPR011006 -
Alju02g3570 688 ProSiteProfiles Response regulatory domain profile. 51 160 IPR001789 GO:0000160
Alju02g3570 688 MobiDBLite consensus disorder prediction 653 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3570 Alju-ChrAlju02 54249632 54260151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3570 41 257 Response Regulator Gene Family AT2G25180 30.973 2.98e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g3570 Response_reg 1.7e-17 CL0304