Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3564 ATGGATTCTAATTCTCCACAAGTTGTTGACTGTGAGAGACTCAACATCGCTGTCTTGCTCGTGGACAATGATACCACCACTCTCTCCGTCAACGCTGGTTTTCTCAGATCATGGCGATACAAAGTTGCAACTGCTACAAGTGGTCATGAAGCTTTGAAGACTCTAAGGGAATTCAGAGGCTTCTTTGATCTCGTCATCACCGACCTTAACATACGAGGAATTAATGGTTTTGAACTCCAAAAACGTGTCAAACGTGAATTCAATCTTCCAGTCATAATTATGTCTGGAGATGGGAGGAATGTGAAGCATGGAGCATCGTATTGCATTATGAAACCAGTACAAAGAGATGACTTAAAAAATGTGTGGCAGTATGTTGTGGCTGGGAAGAGAGAGAAACTAAGAATTGAGAATGGTAGAATAGTATCAGTAAGTGAAGAAGAAGGAGGAGGAGACTCATCACCACCACCAACTGTTAATTCAGCATCGCCTAAAAAGCAAAGGAAGAAGTATTGCAAGAGAAAGCGTAATGAGGTGATTGAGAATGAAGAACTCATATTCTGTGGTCCAAAGAGATCCAAGATTTTCTGGACTACTAATCTTCACAATCGCTTCTTGTTGGCCATAGACTACATTGGCATGGACAAGGCAGTTCCAACGAAGATTCTTGCAATCATGAACGTGCCAGGTTTGACTAGAGCAAATGTTGCCAGTCATTTGCAGAAGTACCGAATGTTTCTGAAGAAAATTGCAGAAAAAGGAATCCTTGATGGATTATCAGAGAAAGCCTTGAGGTCAAAGTTTGCTATAGGCCTTCCCACAGATCTCATCAGAGACCTCCAAAAGAGCGTTAATCATTTTCGTCATCATGAAAATTATTATCATCAACCTTACAGCACCGTTGTTTCTAGGCCTCCAACAACCAGACCTCTTCTCACCTATCAAACCAGACTGGTTCAACCAAACCACTATAGGACCAATCATATTTACAGAAACTTCCAACAATCCCATCATCATGATCAAGCAAATCATCATCTTCATCGTCCTATTGTGAATGGAGGAGGGTTTATGACTTCTGCAAATGCCCTCACTGCAAATGGCGTGATGAGTAACTATTCCTCATCGGGGAACAATAGAAACTTGCCTTATGGAAGCTCTGGCTTGCACCGAACTCCTAGTACTTATAATAACCACTATGGAACTCAATTGAACAACAATGCTTCTCTTACATTTGGTGCATTGAATCGAACTCAGAATGTTGGTTATACGGGTCATAACAACAACAACAGAAGCAACAACAATACATGTGGCTTGTTAAGTAATAGGAGAGATTCAAATAATGCAATTTTTCCTGTCTCATCCTCACTTATGAATGTCTATGTTGAACCAAATCGAGCAAACATATCTGCAGGGTTTCCATCTTTGCCTCAACAGTCAATTAATGGTATTACGAATGTTGATAATCATGATCAGAATAATACTGTCACTTCAGCGAATCAGCAGGAAACTGAACAAATGAATGGTCTTAATGAACTTTTCTTAATGCTAAACGACATGGTTCTTCCTGATGAGACTGCAGAGAGCCCTCATGCTGGTGAACGTTCAAGTTCTGACATTCTTAGGTCCTTTAATGTTGAACACTACATTCAGATGTTGCTGGGAGATGGTGATCATGTGAACGCTCAAACAAGTGAAAGAAGCATCAATGTTCTGCCAAACAATTATTCATCTTGCACCAACCAAAGCCCTAAGATGGTGACGATGAATGATGCATCCACAAACTTGAAGCCATTGAACATGTTGGTGGTGGACAAGGCTAATTCACCATCAGGAAACTCAACTCCTCAGGAGCAGGATTGGGACATGGATCTCCTCGAAAATTTGTTTGGTGCTGCAGATCCCAGCAAGAAGTAA 1911 0.4092 MDSNSPQVVDCERLNIAVLLVDNDTTTLSVNAGFLRSWRYKVATATSGHEALKTLREFRGFFDLVITDLNIRGINGFELQKRVKREFNLPVIIMSGDGRNVKHGASYCIMKPVQRDDLKNVWQYVVAGKREKLRIENGRIVSVSEEEGGGDSSPPPTVNSASPKKQRKKYCKRKRNEVIENEELIFCGPKRSKIFWTTNLHNRFLLAIDYIGMDKAVPTKILAIMNVPGLTRANVASHLQKYRMFLKKIAEKGILDGLSEKALRSKFAIGLPTDLIRDLQKSVNHFRHHENYYHQPYSTVVSRPPTTRPLLTYQTRLVQPNHYRTNHIYRNFQQSHHHDQANHHLHRPIVNGGGFMTSANALTANGVMSNYSSSGNNRNLPYGSSGLHRTPSTYNNHYGTQLNNNASLTFGALNRTQNVGYTGHNNNNRSNNNTCGLLSNRRDSNNAIFPVSSSLMNVYVEPNRANISAGFPSLPQQSINGITNVDNHDQNNTVTSANQQETEQMNGLNELFLMLNDMVLPDETAESPHAGERSSSDILRSFNVEHYIQMLLGDGDHVNAQTSERSINVLPNNYSSCTNQSPKMVTMNDASTNLKPLNMLVVDKANSPSGNSTPQEQDWDMDLLENLFGAADPSKK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3564 636 CDD REC_typeB_ARR-like 18 126 - -
Alju02g3564 636 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 244 IPR006447 GO:0003677
Alju02g3564 636 MobiDBLite consensus disorder prediction 144 169 - -
Alju02g3564 636 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Alju02g3564 636 ProSiteProfiles Response regulatory domain profile. 17 126 IPR001789 GO:0000160
Alju02g3564 636 SMART REC_2 16 122 IPR001789 GO:0000160
Alju02g3564 636 Gene3D - 189 250 - -
Alju02g3564 636 Pfam Response regulator receiver domain 18 120 IPR001789 GO:0000160
Alju02g3564 636 Gene3D - 17 160 - -
Alju02g3564 636 FunFam Two-component response regulator 188 250 - -
Alju02g3564 636 SUPERFAMILY CheY-like 17 130 IPR011006 -
Alju02g3564 636 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 319 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3564 Alju-ChrAlju02 54080126 54085042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3564 14 267 Response Regulator Gene Family AT5G07210 36.426 1.39e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g3564 Response_reg 2.3e-17 CL0304