Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3562 ATGCCCCCCATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCTCATTCATCATCAAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGAGTCTCACTTAAGTTCATGTTTTGGTAACACAGCCAACTCATTTCCTGGAACTGGACGTTCAAATTTGGGTACAGTTTCTGGTGACATGAGTAATGCAATGCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCTAGTTCACTAGTTACAGATGCAAACTCTGCACTATCAGGCGGACCCCGTTTGCAGAGAAGTGTTAGCAATAACACAGACTCATATATACGTTTACCTGCATCGCCCATATCATTCTCATCAAATAATATTAGTATTTCGGGGTCATCTGTTATGGATGGTTCTTCTGTAGTACAGCAGAGTTCTCATCAAGACCAGAATGTTCAACAATTGCAAAAGAATCATGAGCAAATCCAGGGTGCTTCTAGTGCAACATCTTTGCCCGCAGCTCAAACTGGCCCAGCTCCACTGCCAATGGGTACGCGAGTGCCTGGATCTTTGATACAAGATCCAAACAATCTATCCCAGATGCATAAGAAACCTCGATTGGATGTCAAGCAAGAAGATATGATGCATCAGCAGGTAATACAACAACTTCTTCAGAGGCAGGATCCCATGCAGTTCCAGGGTCGTAATCCGCAACTACAGGCTTTGCTCCAGCAGCAGAGACTGAGGCAACAGCAACAGCAACAGCAACAGCAGCAACAAATCCTTCAGTCAATGCCACAGTTACAGAGAGCTCACTTGCAACAGCAGCAGCAACAGATGCAATTGAGGCAGCAATTACAACAAGAAGCAATACAGCCGCCATCTTCCATGAAACGCCCATATGATAGTGGTGTTTGTGCCCGTCGTTTGATGCAATACCTATATCATCAAAGGCAACGACCGAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCGCGTGCAAAGAAACGGTGGTGTTTGTCATTATATGATAATGTCGGGCAACATACTCTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATTTGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCCAGACTAAACAAGATAAAATTTGGCAGTGGGGTGATTGATGAACTTATGTTTTTGGACTTGCCCCGTGAGGGTAGATTTCCTTCTGGCATAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATATTATCTTGGGAATTTTGTGCAAGACGCCATGAAGAGCTTATTCCTCGAAGGATGATTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCAGCGTTCTATTACTGAAAGTGGGTCTGATGGAATTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGCAATAACAGCTGGGTGTCAGCTGGCAAAGACTTTGGACTTACAGTCTCTGAATGACCTGGGTTTCTCAAAACGATATGTGAGATGTTTGCAGATATCGGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCGAGACCACAAAGTTGGGGCACTTGAGGGCTTGAAAAATTATCCTAGGCATGCAACTGCAGCCAAGCTCCAGATGCAAAAGATGCAAGAGATGGAACAGCTAGCGAATGTTCAAGGTCTGCCAACTGACCGGAACACACTTAATAAGCTAATGGCTTTGCATCCTGGATTGAATAACCAAATGAACAACAATCCTAACCTTGTTAATCGTGGTGCATTGGGTGGATCTTCACAAGCTGCATTGGCACTGACTAACTACCAGAATCTCCTCATTAGGCAAAACTCCATGAATTCGACCCCTAACTCACTTCAGCGAGAAGCTTCTCCCTCCTTCAATAATGCAAACCACAGCCCCTCTTCACACTTTCAAGGTGGCGCCGTGGCTTCTTTGCTTCCAGGCTCCATGCAGAACTTGCCTGTCAGCGGTTTCTCAAGTCCCCATTTAACTCCGCAGCAGCAGCAGCAGCTGCAACAACTTAAACAGCACTCATCAAGTGCGAATAGCTTACTTCAACAAAATCATCCACAAGGCTCTCAAGCAAATCAGGCTGTACCTCCCCATATGCTCCAGCAACTAGTTCAGGAATTGTCTCATAACAGCAGTGGAGGAGTTCAATCGCAGTTCCATGCTGGACCGAACCCTAATGGTCTGGGTTTTGGAGTTAACTCTCCATCAGCAACTGGAGGAACTTGCAATGTTTCAGGAAGCAACAGACCTGCTGCTACTAGCAGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCCGGTGGCAACAATGGATTCAGCCAAAGAACATCTGATATGCCTCAAAATCTCCATCTGCAAGATGTGGTTCAGGATATCGCCCGCGAGTTTACTGATAATGGCTTCTTCAATGGTGACCTCGATGACTTTCCGTGGAAGGCATGA 2580 0.4547 MPPMAPSRVAGGLAHSSSSSGIFYQGDGQSQNAVESHLSSCFGNTANSFPGTGRSNLGTVSGDMSNAMLNSVANSGPSVGASSLVTDANSALSGGPRLQRSVSNNTDSYIRLPASPISFSSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQKNHEQIQGASSATSLPAAQTGPAPLPMGTRVPGSLIQDPNNLSQMHKKPRLDVKQEDMMHQQVIQQLLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQQQQQILQSMPQLQRAHLQQQQQQMQLRQQLQQEAIQPPSSMKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNKIKFGSGVIDELMFLDLPREGRFPSGIMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELIPRRMIAPQVSQLVQVAEKCQRSITESGSDGISQQDLQTNSNMAITAGCQLAKTLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKVGALEGLKNYPRHATAAKLQMQKMQEMEQLANVQGLPTDRNTLNKLMALHPGLNNQMNNNPNLVNRGALGGSSQAALALTNYQNLLIRQNSMNSTPNSLQREASPSFNNANHSPSSHFQGGAVASLLPGSMQNLPVSGFSSPHLTPQQQQQLQQLKQHSSSANSLLQQNHPQGSQANQAVPPHMLQQLVQELSHNSSGGVQSQFHAGPNPNGLGFGVNSPSATGGTCNVSGSNRPAATSRSNSFKAASNSDSSAAGGNNGFSQRTSDMPQNLHLQDVVQDIAREFTDNGFFNGDLDDFPWKA 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3562 859 PANTHER LIM DOMAIN-BINDING PROTEIN 45 848 IPR029005 -
Alju02g3562 859 MobiDBLite consensus disorder prediction 687 735 - -
Alju02g3562 859 MobiDBLite consensus disorder prediction 751 827 - -
Alju02g3562 859 MobiDBLite consensus disorder prediction 651 677 - -
Alju02g3562 859 MobiDBLite consensus disorder prediction 651 735 - -
Alju02g3562 859 MobiDBLite consensus disorder prediction 130 196 - -
Alju02g3562 859 Pfam LIM-domain binding protein 305 565 IPR029005 -
Alju02g3562 859 MobiDBLite consensus disorder prediction 130 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3562 Alju-ChrAlju02 54062769 54067712 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3562 288 571 C2H2 Transcription Factor Family AT1G43850 57.746 1.64e-108 352