Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3556 ATGGGTTTCCTCCGGCGAATTTTTGGCGGCAAAAAGCCAGCCTCTCCGTCAGTAGGCTCCCACAAGTCCGGCTCTGAAACTGTCAAGAGTAAACGGAGATGGAGTTTCATCAAACACAGCAAAGACAAATCTCAAAGTGCTACTTCCGATCCCAATCACGTCGACCTTTCCACATCTTCGCTTCCGTACGGTGATTCCTTGAACGCTAATAAACATGCCATTGCAGTCGCCGCGGCGACGGCGGCCGTGGCTGAGGCCGCTCTGGCAGCCGCTCATGCGGCGGCGGAGGTGGTTAGACTCACGAACGGCGGCGGTTGCGGTCCTAGTGCAAGCCAGCACAGGTGGCCGGTAGAGATCGCTGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCACTGGTAAGAGGTCACATTGTAAGAAAGCAAACTGCAGATATGTTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGGGCACGTGCAGGTCGCGTGCAGTTGTCACATATTCTCCATTCTGCCAAGTCTCCTCTCTCTCTTCACCCTGTCTCTGAACACTATGAATCCTCACTTAGAACCAATAGTACTAAATTTGAAGGATCTCCTGTCCTCAAGAGATGCAGTTCCAATGCAAATTCTAGGGACATTGGTTCGGGGAGATCAAGGTTTGGATCACAATGGTACGACCATTATTGGATGGAAGAAAATGTTTGGAACCATCCCAGAGGAGAAGACGATGAGAAGAGTGACAAAATTCTGGAAGTTGATACATGGAAGCCACACTTGAAATCCCAAAACGAGAACCGTTTGGCATATGAGTCTCCCTCAAAGCGTTCAACAAGAAGTGTGAACCAAAGTCTCTTCAGTTCCCTCAAGTTTCAGAAGAGAAAAGAAGAGAAAGCTTCAAGAACAGCAGAGACCAACAACATCATCAAAGAACTCTCAGCCTCCTATTCATATCAGAACAGTCCAGAGTCATTTTCTGCTTCAAGGAGAAGAACAGGTCCTTTCACTCCCACAAGGAGCGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACTGAGTCATCTCGAGCCAAGGCTAGGTCAGTGAGTGCCCCAAGGCAAAGACTTTGTGATTCTGGGAATATCTCAGATAGGCATGCTGATTTAAGAAGCCAATGTTTCACATCAGGCCCTTTGAACAGAGTCTTAAGTACCCGTCTAAGGTGA 1266 0.4874 MGFLRRIFGGKKPASPSVGSHKSGSETVKSKRRWSFIKHSKDKSQSATSDPNHVDLSTSSLPYGDSLNANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGGCGPSASQHRWPVEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARAGRVQLSHILHSAKSPLSLHPVSEHYESSLRTNSTKFEGSPVLKRCSSNANSRDIGSGRSRFGSQWYDHYWMEENVWNHPRGEDDEKSDKILEVDTWKPHLKSQNENRLAYESPSKRSTRSVNQSLFSSLKFQKRKEEKASRTAETNNIIKELSASYSYQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKARSVSAPRQRLCDSGNISDRHADLRSQCFTSGPLNRVLSTRLR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3556 421 Pfam Protein of unknown function (DUF4005) 337 394 IPR025064 -
Alju02g3556 421 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Alju02g3556 421 PANTHER IQ-DOMAIN 5-RELATED 27 395 - -
Alju02g3556 421 SMART iq_5 139 160 IPR000048 GO:0005515
Alju02g3556 421 SMART iq_5 116 138 IPR000048 GO:0005515
Alju02g3556 421 MobiDBLite consensus disorder prediction 25 48 - -
Alju02g3556 421 Gene3D - 116 169 - -
Alju02g3556 421 MobiDBLite consensus disorder prediction 1 55 - -
Alju02g3556 421 MobiDBLite consensus disorder prediction 338 358 - -
Alju02g3556 421 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Alju02g3556 421 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Alju02g3556 421 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Alju02g3556 421 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3556 Alju-ChrAlju02 54001888 54004406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3556 1 411 IQD Protein Family AT5G07240 45.327 1.10e-62 207