Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3543 ATGGCTTTACCTTTCAGTCTTCCTCTTCTTCATTTCCTTTTTGTGTTCCACCTCTCCTGTTTCCTTGCTTTTGGTTTCACGCACCAGGCTGATGAAAGCTATGAGAAAAATCTTCTTCTTTCTTTCAAAACCAGTCTCCATAACCCCCACCTTCTTCCTTCATGGAACTCCTCAACCCCTCACTGCAACTGGGTTGGCGTTACTTGTGAACTCGACCGAGTTACCTCACTTTCTCTTCCGACTCTGCACCTCGAAGGCCCACTCCCTTCGTCTCTCTTCTCCCTTACCGGCCTTACCGTCCTCAACTTATTCTCCAACGCACTCTCTGGTGATATTCCTCCACAGATAGCTAACCTGAGAAACTTGAGGGAGCTCAATCTTAGTTATAATCAGTTTTCCGGCGAAATTCCAGACGAGCTCAGCGGTTTGACTCAGCTTACCACTCTCGCACTCGGCTCCAACTTTTTTACCGGAAAAATCCCGCCGGAGCTGGGGTTCCTGTCACAACTCCGTGTCCTCGACCTCTCTGGTAATGACCTCACCGGAACCGTACTGGAAAGCTTCGGAAACCTGAGTCAGCTTCAGTTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTCTTTACCCTTGTCTCTTTTCACGGGAACTCTGTCTTTGATTTCCGTTGACGTTTCAAACAATTCGTTTTCTGGTTCTCTGCCGCCGGAAATCCGTAACTTGAGGAATATCACTGCCCTTTACATTGCCTCTAATAAATTTACGGGTAGGTTGCCTCCTGAGGTTGGCGAGCTTGCGCGGCTTCAAGTGCTTTATGCACCTTCTAGTTCTATAGAAGGTCCATTGCCTGAAGAAATGTCGAAACTGAAGTCATTGTCTAATCTTGACCTTTCTTACAACCCCTTGAAGTGTTCGATACCGAAGTTTATTGGGAAGCTTCAGAATTTGAAATTGCTTGACCTTTCTTTTGCTCAGCTTACTGGCTCCATACCGTCTGAGCTTGGAAGTTGTAGAAACTTGAGTTCTGTGATGCTTTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGGAGCTTTCCGGGATTCCAATGGTGTCATTCATAGCTGAAAGGAATCAGTTTCATGGACTTTTACCCGCCTGGCTGGGAAAGTGGAATCAGATTGATACTCTTTTGCTCTCGCAGAATAGATTTTCTGGTATAATTCCTCCTGAGCTTGGGAATTGCTCTTCATTGGAGCACCTCAGTTTGAGAAGTAACTTGCTGACAGGTCCCATTCCTGAGGAGCTATGTAATGCCGCCTCACTTATGGAGATTGACTTTGATGATAACTACCTTACTGGCACAATTGAGAAAGCATTTGTTAGGTGTAAGAACCTTGTCCAGTTAGAATTGATGAAAAATCAGATCACTGGTTCTATCCCACAGTACCTTTCAGAGCTTCCTTTGATGGTGCTTGACCTTGACTCGAACAATTTTAGTGGAAGCATACCTTCAAGTCTGTGGAATTCATCAACTCTAATGGAGTTTTCTGCTGCAAATAATCGTCTGCAGGGCTGTCTTCCTGCGGAGATTGGGAATGCTGTTCTTCTAGCGAGGCTTGTCCTTAATAACAATCAATTGACGGGTACTATACCCAAGGAAATTGGAAATCTCACGGGTCTATCTGTTCTTAATTTGAATGGAAATCTTCTTGAAGGGAATATCCCATCAGAGCTAGGAGATTGCATTTCACTTACAACCTTGGACCTTGGAAATAATCAACTGAATGGATCTATTCCAGATGAACTGGTGGAACTGAGCCAATTACAGTGTCTAGTTCTGTCCCATAATAATCTGTCTGGGTCTATTCCTGCAAAACGATCTTCATATTTTAGCAGAATCGCCATCCCTGATTTGAGCTTTGTTCAACACCTTGGAGTGTTTGATCTGTCCCATAACAAATTGTCTGGGATTATACCTGATGAACTGGGGAGCTGTGTGGTCGTTGTGGATCTTTTGCTCAGTAACAACATGCTTTCTGGGAGTATCCCGGGCTCACTCTCTCGCCTGTCAAATCTTACAACCCTAGATTTGTCTGGTAACTTCTTGTCAGGTTCCATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGGATTATATCTGGGGCATAATCAGCTTAATGGTACCATCCCTGAAAGTTTTGGGAAAATGAGCAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCGATTCCAATTAGCTGCGGGAACATGAAGGAGCTTACTCACTTAGATTTGAGCTCTAATGAGCTTAGTGGCCAGCTTCCATCCTCTCTATCAGGTCTTCAAAGCCTTGTTGGTCTTTATGTGCAGGAGAACAAGCTTTCTGGGCAAATAGATATGCTCTTCTCCAATACCATGACATGGAGGATTGAGGCAATGAATTTGAGCGTCAATTGCTTCAATGGGGATTTGCCAAGTTCTTTGGGAAACCTTTCTTACTTGACAAATTTGGATGTTCATGGAAATATGTTCATGGGAGAGATTCCACTGGAACTTGGGAATCTAGTGCAGCTGGAGTACGTTGATGTTTCTGGGAACAGGTTATATGGAAAGATTCCTGAGAAAATTTGCAGCCTAGTTAATCTGAACTACCTTGATTTGTCTCAGAACAGATTGGAAGGGCCTGTACCCAGAAGCGGTATTTGCAAGAACCTATCAAGAGTTATACTAACAGGAAACAAAAATCTCTGTGGGCGGATTTTGGGCGTCAATTGCCCAATCAAAAGCATTGGTAGATTTTCCTTGTCTAATGCGTGGCAACTTGCTGCGATTGCCATTACAATCACACTGATGACTCTGAGCGTTGCATTTGTTCTACACAGATGGATTGGCAGGAAGCAAAATGATCCAGAAGACCTTGAGGAACACAAGCTAAACAACTATGTGGATCAAAATCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTCTAAGCATAAATGTTGCAATGTTTGAGCAGCCTCTTCTAAAACTAACCTTGGAGGATATCCTTGAAGCTACTGGCAACTTCAGCAAGACTAACATAATTGGAGATGGAGGTTTTGGGACTGTATACAAAGCTACTTTACCCAATGGCAAAACAGTTGCAGTAAAGAAGCTGAGTGAAGCTAAAACGCAGGGCCATCGCGAGTTCATGGCTGAAATGGAAACTTTGGGCAAGGTGAAACATCAGAATCTTGTTCCACTTCTTGGCTATTGCTCCTTGGGTGAAGAGAAACTCCTTGTTTATGAATACATGGTGAATGGAAGCTTAGATCTATGGTTGAGAAACAGGACTGGTGGAGCCCTTGAAGTCCTTGACTGGAACAAAAGGTACAAAATTGCAACTGGTGCAGCCAGAGGATTAGCTTTCCTTCATCACGGGTTCATCCCCCACATCATTCACAGAGACATTAAAGCAAGCAACATATTGCTAAATGAAGATTTTGAGCCTAGAGTTGCAGACTTTGGACTTGCTAGGCTTATCAGTGCCTGTGAGTCACACATCACCACTGACATTGCTGGAACATTTGGGTACATTCCGCCGGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATATCTATAGTTTTGGGGTCATCATGCTTGAACTGGTGACTGGAAAAGAACCGACAGGGCCTAATTTTAAAGACATTGAAGGTGGGAATCTGGTGGGGTGGGTTTTTCTGAAGATCAAGAAGGGACAGGCCGCTGATGTTCTTGATCCAAAGGTTCTGGATGCCGATTCGAAGCCGATGATGCTTCGGATGCTGCAGATTGCTTGTGTGTGCCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAGGTGCTCAAGCTTTTGAAGGGGATCAAAGGAGAGTAG 3903 0.443 MALPFSLPLLHFLFVFHLSCFLAFGFTHQADESYEKNLLLSFKTSLHNPHLLPSWNSSTPHCNWVGVTCELDRVTSLSLPTLHLEGPLPSSLFSLTGLTVLNLFSNALSGDIPPQIANLRNLRELNLSYNQFSGEIPDELSGLTQLTTLALGSNFFTGKIPPELGFLSQLRVLDLSGNDLTGTVLESFGNLSQLQFLDLSNNLLSGSLPLSLFTGTLSLISVDVSNNSFSGSLPPEIRNLRNITALYIASNKFTGRLPPEVGELARLQVLYAPSSSIEGPLPEEMSKLKSLSNLDLSYNPLKCSIPKFIGKLQNLKLLDLSFAQLTGSIPSELGSCRNLSSVMLSFNSLSGSLPEELSGIPMVSFIAERNQFHGLLPAWLGKWNQIDTLLLSQNRFSGIIPPELGNCSSLEHLSLRSNLLTGPIPEELCNAASLMEIDFDDNYLTGTIEKAFVRCKNLVQLELMKNQITGSIPQYLSELPLMVLDLDSNNFSGSIPSSLWNSSTLMEFSAANNRLQGCLPAEIGNAVLLARLVLNNNQLTGTIPKEIGNLTGLSVLNLNGNLLEGNIPSELGDCISLTTLDLGNNQLNGSIPDELVELSQLQCLVLSHNNLSGSIPAKRSSYFSRIAIPDLSFVQHLGVFDLSHNKLSGIIPDELGSCVVVVDLLLSNNMLSGSIPGSLSRLSNLTTLDLSGNFLSGSIPPELGDSLKLQGLYLGHNQLNGTIPESFGKMSSLVKLNLTGNKLSGPIPISCGNMKELTHLDLSSNELSGQLPSSLSGLQSLVGLYVQENKLSGQIDMLFSNTMTWRIEAMNLSVNCFNGDLPSSLGNLSYLTNLDVHGNMFMGEIPLELGNLVQLEYVDVSGNRLYGKIPEKICSLVNLNYLDLSQNRLEGPVPRSGICKNLSRVILTGNKNLCGRILGVNCPIKSIGRFSLSNAWQLAAIAITITLMTLSVAFVLHRWIGRKQNDPEDLEEHKLNNYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLEDILEATGNFSKTNIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGGALEVLDWNKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPRVADFGLARLISACESHITTDIAGTFGYIPPEYGQSGRSTTRGDIYSFGVIMLELVTGKEPTGPNFKDIEGGNLVGWVFLKIKKGQAADVLDPKVLDADSKPMMLRMLQIACVCLSDNPANRPTMLQVLKLLKGIKGE 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3543 1300 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Alju02g3543 1300 ProSitePatterns Protein kinases ATP-binding region signature. 1027 1050 IPR017441 GO:0005524
Alju02g3543 1300 FunFam serine/threonine-protein kinase BRI1-like 2 982 1096 - -
Alju02g3543 1300 SUPERFAMILY L domain-like 52 362 - -
Alju02g3543 1300 SMART LRR_typ_2 191 215 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 575 598 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 852 876 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 682 706 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 634 658 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 167 190 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 754 778 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 95 118 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 407 431 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 119 143 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 240 264 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 550 574 IPR003591 -
Alju02g3543 1300 SMART LRR_typ_2 312 336 IPR003591 -
Alju02g3543 1300 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Alju02g3543 1300 Pfam Leucine rich repeat 683 743 IPR001611 GO:0005515
Alju02g3543 1300 SUPERFAMILY RNI-like 591 927 - -
Alju02g3543 1300 SMART LRR_sd22_2 191 212 - -
Alju02g3543 1300 SMART LRR_sd22_2 876 904 - -
Alju02g3543 1300 SMART LRR_sd22_2 167 190 - -
Alju02g3543 1300 SMART LRR_sd22_2 288 317 - -
Alju02g3543 1300 SMART LRR_sd22_2 754 780 - -
Alju02g3543 1300 SMART LRR_sd22_2 455 478 - -
Alju02g3543 1300 SMART LRR_sd22_2 634 655 - -
Alju02g3543 1300 SMART LRR_sd22_2 682 714 - -
Alju02g3543 1300 ProSiteProfiles Leucine-rich repeat profile. 121 144 IPR001611 GO:0005515
Alju02g3543 1300 Pfam Protein kinase domain 1022 1292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3543 1300 SMART serkin_6 1021 1294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3543 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Alju02g3543 1300 ProSiteProfiles Protein kinase domain profile. 1021 1300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3543 1300 Gene3D Phosphorylase Kinase; domain 1 984 1096 - -
Alju02g3543 1300 FunFam serine/threonine-protein kinase BRI1-like 2 1097 1300 - -
Alju02g3543 1300 Gene3D Ribonuclease Inhibitor 216 364 IPR032675 -
Alju02g3543 1300 Gene3D Ribonuclease Inhibitor 365 622 IPR032675 -
Alju02g3543 1300 Gene3D Ribonuclease Inhibitor 623 925 IPR032675 -
Alju02g3543 1300 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515
Alju02g3543 1300 Pfam Leucine Rich Repeat 757 778 IPR001611 GO:0005515
Alju02g3543 1300 SUPERFAMILY Protein kinase-like (PK-like) 1002 1294 IPR011009 -
Alju02g3543 1300 FunFam Leucine-rich repeat receptor protein kinase EMS1 364 623 - -
Alju02g3543 1300 FunFam leucine-rich repeat receptor protein kinase EMS1 214 363 - -
Alju02g3543 1300 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Alju02g3543 1300 FunFam Leucine-rich repeat receptor-like protein kinase 32 186 - -
Alju02g3543 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 630 926 - -
Alju02g3543 1300 CDD STKc_IRAK 1027 1297 - -
Alju02g3543 1300 SUPERFAMILY L domain-like 368 614 - -
Alju02g3543 1300 Gene3D Transferase(Phosphotransferase) domain 1 1097 1300 - -
Alju02g3543 1300 Gene3D Ribonuclease Inhibitor 142 215 IPR032675 -
Alju02g3543 1300 PRINTS Leucine-rich repeat signature 757 770 - -
Alju02g3543 1300 PRINTS Leucine-rich repeat signature 876 889 - -
Alju02g3543 1300 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 679 1295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3543 Alju-ChrAlju02 53879424 53883326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3543 30 1297 Receptor kinase-like Gene Family AT5G07280 58.399 0.0 1391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Alju02g3543 Pkinase 1.7e-44 CL0016