Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3531 ATGGGGAGGCAGCCAGCTGATAAGGCAAAACCTAAACACAGGAAAGGGTTATGGTCACCTGAAGAAGACAATAAGCTCAGAAACTATATAATCAAGCATGGCCATGGCTGCTGGAGCTCTGTTCCCGTCAATGCAGGCTTGCAGAGGAATGGGAAGAGTTGCAGATTAAGGTGGATCAACTATCTAAGGCCAGGATTGAAGAGAGGGATGTTCAGCAAACAAGAAGAGGAGACAATCTTGGCCCTTCACCACATGCTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAGCCCAAGGCAGAGGAAATACAATCTCATAATAATTATAAACAAATGCAGTACGCTAGCTCAAGCTCAGATACCTTTGATTCTTCTTCATCATCAAGTCAAAAACCAGCAATTCCAATCTCTGATCACTTCTCTTCTTTGCAAAACTATAACTCCATCAAAGAGGCTGGTCAGAGCTCCTTGCCAAAACTTCTATTTGCTGAGTGGCTTTCACTGGATCAAGCGAACAGTGGGGTCCCTGCAAATTCAGGTGATGATGACCCTTTTGTGTTCGGAAATGGAGGTTTTGATCAGTACTCAGATTTCCACGAAGCTGCGGTGCATGGTGTATCGGAAGGAGGAAGCTATGGTGGAGAGTTTGATAATGGTTTAACAATCCCAAATGCTGCAGCAGCTACTGAAGTCTTCAATGCACAGTTCAAGATAGCAAATCAAATGGCAGGAAATGGGGTCATCCATTTCCCAAGTTTCAGCATGAACAATGATCAAATGTACATATAG 855 0.4351 MGRQPADKAKPKHRKGLWSPEEDNKLRNYIIKHGHGCWSSVPVNAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILALHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVAKPKAEEIQSHNNYKQMQYASSSSDTFDSSSSSSQKPAIPISDHFSSLQNYNSIKEAGQSSLPKLLFAEWLSLDQANSGVPANSGDDDPFVFGNGGFDQYSDFHEAAVHGVSEGGSYGGEFDNGLTIPNAAAATEVFNAQFKIANQMAGNGVIHFPSFSMNNDQMYI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3531 284 Gene3D - 70 142 - -
Alju02g3531 284 FunFam MYB transcription factor 70 146 - -
Alju02g3531 284 CDD SANT 18 62 IPR001005 -
Alju02g3531 284 CDD SANT 71 113 IPR001005 -
Alju02g3531 284 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Alju02g3531 284 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju02g3531 284 SMART sant 67 115 IPR001005 -
Alju02g3531 284 SMART sant 14 64 IPR001005 -
Alju02g3531 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Alju02g3531 284 Gene3D - 15 67 - -
Alju02g3531 284 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Alju02g3531 284 MobiDBLite consensus disorder prediction 136 155 - -
Alju02g3531 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Alju02g3531 284 PANTHER MYB DOMAIN PROTEIN 55 1 167 - -
Alju02g3531 284 FunFam MYB transcription factor 12 68 - -
Alju02g3531 284 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Alju02g3531 284 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3531 Alju-ChrAlju02 53746148 53748409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3531 8 188 MYB Transcription Factor Family AT3G48920 53.846 2.03e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g3531 Myb_DNA-binding 1.7e-12 CL0123