Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3529 ATGGGGAGGTCACCATGTTGTGATAAAGATGGAGTGAGAAAAGGAGCTTGGACTCCTGAAGAAGATGAAATCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGAAATTGGCGGACACTACCCAAGAATGCAGGCCTACTTCGATGCGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTCCGACCTGACATCAAGCGTGGCCCTTTTACTGGTGAAGAAGAAGGTAAAATTATTCAACTTCATGGCATGCTCGGAAACAGGTGGGCTGCTATAGCATCTCATTTACCAGGAAGAACAGACAATGAAATTAAGAACTATTGGAACACGCATCTGAAGAAGCGTCTCCGTCGCTCAAGTCATTCTCCGGAGGCAAAAGAGCCCTCTTTTGGTACTCATCAAACTGATAAGAAATATGAATCTTTTTCTGCTGTACGTCATGTGATCCAGTGGGAAAATGCCAGAGTGGAGGCAGAAAAAAGACTGTCAATGGAATTGGAATCCTCATGTCTCAATCATTATTCCAAAACCAACACACATTCTGATTGCTTTCTTCGACTTTGGCACTCCGAGGTAGGACAATCATTTCGCATGATCACGGTAAAGAAATCAGAAAGCGACAGCCCCACTTCGCAAGCAAGCAGTGTCTTTGCGAACTTGGCTCATCAAGAACAAGCAAGCAGCTGCAATCCAAAGCTTGAAGAAGGCACAGCTGGGTCAGATTCAGCTTCTCTTGAATTTCTTGATGCTTCTGATTCTGCATTAAAGCTTCTACTAGATATGCCTGATGGTAATGTAGGATTCTTTGAAGGATTGGAACAGAGTGAGAATTTCCTGGGTCCTCTGCATGATAGATATGGCTAA 864 0.4387 MGRSPCCDKDGVRKGAWTPEEDEILVQYIKKHGCGNWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTGEEEGKIIQLHGMLGNRWAAIASHLPGRTDNEIKNYWNTHLKKRLRRSSHSPEAKEPSFGTHQTDKKYESFSAVRHVIQWENARVEAEKRLSMELESSCLNHYSKTNTHSDCFLRLWHSEVGQSFRMITVKKSESDSPTSQASSVFANLAHQEQASSCNPKLEEGTAGSDSASLEFLDASDSALKLLLDMPDGNVGFFEGLEQSENFLGPLHDRYG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3529 287 CDD SANT 69 112 IPR001005 -
Alju02g3529 287 Gene3D - 14 66 - -
Alju02g3529 287 Gene3D - 68 141 - -
Alju02g3529 287 CDD SANT 16 61 IPR001005 -
Alju02g3529 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju02g3529 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g3529 287 MobiDBLite consensus disorder prediction 117 136 - -
Alju02g3529 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 213 - -
Alju02g3529 287 SMART sant 66 114 IPR001005 -
Alju02g3529 287 SMART sant 13 63 IPR001005 -
Alju02g3529 287 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju02g3529 287 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g3529 287 FunFam Myb transcription factor 11 67 - -
Alju02g3529 287 FunFam MYB transcription factor 69 116 - -
Alju02g3529 287 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g3529 287 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju02g3529 287 MobiDBLite consensus disorder prediction 120 136 - -
Alju02g3529 287 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3529 Alju-ChrAlju02 53726016 53729074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3529 1 270 MYB Transcription Factor Family AT3G61250 54.643 5.18e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g3529 Myb_DNA-binding 5.4e-16 CL0123