Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3500 ATGGGTTTTTCCTTTTCACCACCACTTACTTTCATTTTCTCTCTCCTAGTTTTTGCTCTCTTGAACCCAAAATGGGTATGTGGAGATACAGAGCTAAGAGCACTTATGGATATCAAAGCTGCTTTGGACCCAGAAAGCCATTATTTGTCTTCATGGATTATTAATGGAAAACCATGTGATGGTTCGTTTGAAGGAGTTGGTTGTAACGAGCAGGGTCAAGTGGCTAACATTTCATTGCAGGGAAAAGGTCTCTTTGGCAAACTTTCGCCTGCCATTGCTGAGCTCAAGCAACTTACAGGGCTTTACTTGCATTATAACTCCTTGCAGGGAACTATTCCCAGAGAAATTGCCAACTTGACTTACCTAAGTGACTTGTATTTGAATGTGAATAACCTTTCTGGTGAAATCCCTCCTGAGATTGGCAAAATGGAGAACCTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCAACACAGCTTGGTGCACTGAAGAAACTTGTGGTTCTTGCTCTTCAGTCAAATCAATTAGCTGGTGCCATCCCTGCAAGTTTAGGTGATTTGGGAATGCTAATGAGGCTTGATCTAAGCTCCAATCGCCTCTTCGGTTCCCTTCCCTCTACATTAGCAGATGCTCCTTCCCTTCGAGTTCTAGATGTTCGCAACAACACCCTCTCTGGAAATGTACCTCCTGCTCTGAAGAGACTAGATGATGGATTTTTATACAAGTACAATTTGGGATTATGTGGAGTTGGGTTTTCATCCTTGAAAACTTGCAATTCTTCGGATCAAAGTAATCCTGAGAGGCCTAATAAACCTTATGGAGCTGGTTTTAGTGGTACATCAGCGAAAGATATACCAGAAACTGCAAATGTGCCACTTCCTTGCAATGGAACTCGGTGCCAAAATTCATCAAAACCCAAACAATCAGCACCTTCTATCATTGTTGGCATAGTTGTGTTTGCAATTGCAGTGCCAACAATTGGTGTTCTAACTTTCACACAATACCGTAGGCGAAAGCAAAAGCTCAGAAACTCATTTGATATCTCAGATAATGGCCTAATCATGAGCCAAGCCAAGGGTACATACCAAAAAAACGGATCTCCTTTGGCCAGCCTTGAGTACTCTAATGGCTGGGACCCGTTGGCTGAAAGCCGGAATTTCATGGGTGATAGCTATGATGTGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTTGAGACTGCTACTCAGTATTTCTCAGAGTTGAACATGTTGGGTAAGAGTATCTTCAGTGCGACGTATAAGGGAATGTTAAGAGATGGATCTGTTGTTGCCATTAAAAGAATCAGTAAGACAAGCTGCAAGAGTGATGAGTCTGAGTTTTTGAAGGGACTTCACATTTTGACCTCACTAAGGAACGAGAATTTAGTGAGGTTGAGAGGTTTTTGTTGCTCAAGGGGGCGAGGCGAGTGCTTTCTAGTCTATGACTTTGTTCATAATGGAAATCTTTCGAACTACCTCGATGTCAACGAAGGCGAAGGACAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTTAAAGACATTGCTAAAGGAATAGCATATTTACATGCCTACAAGCCAAACAAGCTAGCCCTTGTTCATCAGAACATCTCAGCTGAGAAAGTGCTCATAGATCAGCGGTTCAACCCGATGCTTTCGGATTCCGGCCTTCAAAATCTTCTTACCGATGACATTGTCTTCTCAGCACTGAAGGCTAGCGCAGCAAAGGGTTATTTGGCTCCTGAATACACGACCACTGGCAAGTTCACAGAGAAAAGTGATATGTATGCTTTTGGAGTGCTTCTTTTGCAGATCATCTCGGGGAAAAGGAAGATCACTAGCTCTATGCGCCTCGCTGCAGAATCTTCAAGACTTGAAGAACTCATTGACCCAAATCTCCATGGAAGATTCGTTGAATATGAGGCTGCGAAGCTTGTGAAAATGGCCTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGACCATTGATGGAAGCCATTGTTCTAGAACTTGAAAGTTTCAATACTTGTCTCTGA 2067 0.4272 MGFSFSPPLTFIFSLLVFALLNPKWVCGDTELRALMDIKAALDPESHYLSSWIINGKPCDGSFEGVGCNEQGQVANISLQGKGLFGKLSPAIAELKQLTGLYLHYNSLQGTIPREIANLTYLSDLYLNVNNLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGALKKLVVLALQSNQLAGAIPASLGDLGMLMRLDLSSNRLFGSLPSTLADAPSLRVLDVRNNTLSGNVPPALKRLDDGFLYKYNLGLCGVGFSSLKTCNSSDQSNPERPNKPYGAGFSGTSAKDIPETANVPLPCNGTRCQNSSKPKQSAPSIIVGIVVFAIAVPTIGVLTFTQYRRRKQKLRNSFDISDNGLIMSQAKGTYQKNGSPLASLEYSNGWDPLAESRNFMGDSYDVFHSFRFNLEEVETATQYFSELNMLGKSIFSATYKGMLRDGSVVAIKRISKTSCKSDESEFLKGLHILTSLRNENLVRLRGFCCSRGRGECFLVYDFVHNGNLSNYLDVNEGEGQVLEWSTRVSIVKDIAKGIAYLHAYKPNKLALVHQNISAEKVLIDQRFNPMLSDSGLQNLLTDDIVFSALKASAAKGYLAPEYTTTGKFTEKSDMYAFGVLLLQIISGKRKITSSMRLAAESSRLEELIDPNLHGRFVEYEAAKLVKMALLCSHESPFERPLMEAIVLELESFNTCL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3500 688 FunFam Protein NSP-INTERACTING KINASE 2 141 263 - -
Alju02g3500 688 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Alju02g3500 688 Gene3D Ribonuclease Inhibitor 25 274 IPR032675 -
Alju02g3500 688 Gene3D Phosphorylase Kinase; domain 1 387 494 - -
Alju02g3500 688 SUPERFAMILY Protein kinase-like (PK-like) 398 682 IPR011009 -
Alju02g3500 688 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Alju02g3500 688 ProSiteProfiles Protein kinase domain profile. 416 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3500 688 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Alju02g3500 688 Pfam Protein tyrosine and serine/threonine kinase 420 680 IPR001245 GO:0004672|GO:0006468
Alju02g3500 688 FunFam Protein NSP-INTERACTING KINASE 2 387 494 - -
Alju02g3500 688 MobiDBLite consensus disorder prediction 263 283 - -
Alju02g3500 688 FunFam Leucine-rich repeat receptor-like kinase 30 139 - -
Alju02g3500 688 SUPERFAMILY L domain-like 27 237 - -
Alju02g3500 688 FunFam Protein NSP-INTERACTING KINASE 2 495 685 - -
Alju02g3500 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 149 684 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3500 Alju-ChrAlju02 53424637 53427702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3500 15 529 Miscellaneous Gene Families AT4G22730 54.685 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Alju02g3500 PK_Tyr_Ser-Thr 1.7e-35 CL0016