Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3473 ATGCCTTACACCTCTATAAAACGCAATATATATCGCACGAAGAAGGTCAGAAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCAGCTGGATCTTCCAATGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGTTTGAACAAACCATTCCAGAGTCGACCTATGAAGAAGATGAAACTGGTTAAGACAGAGAAATGTGGTTCGGGAATTGTGGCAGAAGAGGATATTGAACAGGGGGAGTTTGTGATTGAATATGTGGGAGAAGTCATTGATGACAAAGAATGTGAACAGAGGCTTTGGAATATGAAGCATCGAGGGGAGACAAACTTCTACTTATGTGAAATAAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGACGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATTAAAAAGGGGGAACATCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGGGTTCGACCACCCAAGCCCAAAATGGCTTCTGATGCTGCATTAAAGTTAGTTGCATATCAGGTTTATCAAAATGGACGTATGCATACAGGAGGTTGTTCGCACAATTGCCTTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCCAAAAAGCATTTGATCATGTTTGAGGATGGCACTGTTAATTCTGTTGACATGTCAGAAGAAGACTGGGAACTTGTGAGTCTAAATGGTTACTTATGGAGTCTGAGGAAATTATGTTATGGTTTTGGGGCTTTGAGTGGAGCAGGGCAGCAGGCATACGTTACTCTTAGGATGGCTTGGTTGCCATTAGTTACTACTACACCTCCAGCATTTCCCCTCATTTCTAATAGGGAAAGACAGGTGGAGAGGTGA 1059 0.4202 MPYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSNVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQSRPMKKMKLVKTEKCGSGIVAEEDIEQGEFVIEYVGEVIDDKECEQRLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKMASDAALKLVAYQVYQNGRMHTGGCSHNCLGQVVRINERFGIIRRFDKYSKKHLIMFEDGTVNSVDMSEEDWELVSLNGYLWSLRKLCYGFGALSGAGQQAYVTLRMAWLPLVTTTPPAFPLISNRERQVER 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3473 352 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 279 IPR025787 -
Alju02g3473 352 ProSiteProfiles AWS domain profile. 23 72 IPR006560 GO:0005634|GO:0042054
Alju02g3473 352 SMART set_7 74 197 IPR001214 GO:0005515
Alju02g3473 352 Gene3D SET domain 1 229 IPR046341 -
Alju02g3473 352 PANTHER SET DOMAIN PROTEINS 2 230 - -
Alju02g3473 352 ProSiteProfiles SET domain profile. 74 191 IPR001214 GO:0005515
Alju02g3473 352 SMART PostSET_3 197 213 IPR003616 -
Alju02g3473 352 SUPERFAMILY SET domain 2 209 IPR046341 -
Alju02g3473 352 FunFam Histone-lysine N-methyltransferase 1 229 - -
Alju02g3473 352 ProSiteProfiles Post-SET domain profile. 197 213 IPR003616 -
Alju02g3473 352 CDD SET_ASHR3-like 75 213 - -
Alju02g3473 352 SMART shorttest3 23 73 IPR006560 GO:0005634|GO:0042054
Alju02g3473 352 Pfam SET domain 85 190 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3473 Alju-ChrAlju02 52972022 52977191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3473 53 209 C2H2 Transcription Factor Family AT2G23740 35.593 1.66e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju02g3473 SET 5.9e-20 No_clan