Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3469 ATGGACTCTAGCGATTGTCATGTTTCATGTAAAAGGCCAAGCCCTTCTTCTTGTTCAGCCATTAATGAACAAGAGCTTAAAGAACAGAAAAAGATAATGGTAGTAAGGTACAAGGAATGCCTCAAGAACCATGCAGCTTCATTAGGTGGACATGCAATTGATGGTTGTGGTGAGTTCATTTCTTCTTCAGAAGTAGAAGAAGGCTCACTTGAAGCTTTCAAGTGCTCAGCCTGCAATTGCCACAGAAACTTCCACAGAAAGGAGATCCAATTCTGTTATAATTCAAACTCTAATTATCAGAATCATCTCTCCCCATTTCTTCCAAACACATCTCAGATCATTAATCTGGATAATCTTTTATCATCTCCCAACAAAACTGGCTCAAATCTTTCTGATCAGTCACATGATGATCATGGGGAAGAAGAAGATCATAGGAATCAGAATTATAAAGAAGAAGATGAGAAGGTGGTGAAGAAGAGGTTTAGGACTAAGTTCAGCGCAGAACAGAAGGAGAAGATGGTGAGATTTGCTGAGAAAGTAGGGTGGAAGATGCAGAAAGTTGAAGAATCTGTGGTGGATCAGTTTTGTGAAGAGATAGGAATTAAGAGGAGAGTCCTCAGAGTGTGGATGCACAATAACAAGAATACTTATGCCAAAAGCTTGTGA 666 0.3949 MDSSDCHVSCKRPSPSSCSAINEQELKEQKKIMVVRYKECLKNHAASLGGHAIDGCGEFISSSEVEEGSLEAFKCSACNCHRNFHRKEIQFCYNSNSNYQNHLSPFLPNTSQIINLDNLLSSPNKTGSNLSDQSHDDHGEEEDHRNQNYKEEDEKVVKKRFRTKFSAEQKEKMVRFAEKVGWKMQKVEESVVDQFCEEIGIKRRVLRVWMHNNKNTYAKSL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3469 221 MobiDBLite consensus disorder prediction 124 154 - -
Alju02g3469 221 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 36 89 IPR006456 -
Alju02g3469 221 MobiDBLite consensus disorder prediction 131 154 - -
Alju02g3469 221 FunFam Zinc-finger homeodomain protein 2 145 219 - -
Alju02g3469 221 SUPERFAMILY Homeodomain-like 156 219 IPR009057 -
Alju02g3469 221 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 37 88 IPR006456 -
Alju02g3469 221 Pfam ZF-HD protein dimerisation region 35 89 IPR006456 -
Alju02g3469 221 Gene3D - 142 220 - -
Alju02g3469 221 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 22 216 - -
Alju02g3469 221 NCBIfam homeobox domain, ZF-HD class 158 215 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3469 Alju-ChrAlju02 52946835 52947500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3469 28 219 ZF-HD Transcription Factor Family AT2G02540 47.642 2.05e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju02g3469 ZF-HD_dimer 5.9e-28 No_clan