Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3418 ATGGAGATAGAGGCGAGCAGGGCGGTTGGGAATAATAATCATGGGACGGCGGCGATTCCGGGGCTGAGTCCACTCAGTGAGACGTTGTGGAGGGAGACAAAGGCCAATGTTGATTTTGTCGGAGATGTGTCGGCTAGGCTGACATGGAAGGATCTCACCGTCATGGTTACTCTTAGCAACGGAGAGACCCAGAATGTTCTAGAAGGTCTCACCGGCTACGCCGAGCCCGGCACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCTCTAGCCGTCTAGCCGCTAATGCCTTCCTCTCTGGATCCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTCGGAACTGCCGCATATGTGACGCAAGACGATAACCTTATCGGAACTTTGACAGTACGAGAAACGATATCGTACTCGGCGAGTCTGAGGATGCCGGATAAGATGCCATGGTCAGACAAGCGAGCTTTGGTGGAGAGTACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGAGGAGAGAAGAGAAGAGTTAGTATCGCTTTGGAGATCTTAATGAGGCCCAGGATGTTGTTTCTTGATGAACCTACCAGTGGTCTCGACAGTGCTTCAGCTTTCTTTGTGACACAAACACTAAGAGCCCTTGCAAGGGACGGTCGAACAGTGATAGCTTCAATTCACCAACCTAGCAGTGAAGTCTTTGAACTCTTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCCTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGAAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTAAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACCACAGCTGAAGCTATCCGAACTCTCATAGATTATTATCGGACTTCTCAGTACTCTTATGCTGCAACACAGAAAGTGGATGAGATTTCTAAAGTGAAAGGGACGGTGCTGGATTCTGGAGGAAGCCAGGCTAGTTTCTTCATGCAGGCTTTTCAATTAACAAAGCGATCCTTCGTCAACATGTCCAGGGACTTCGGTTACTACTGGCTTCGCCTCGTCATCTACATCGTCGTCACCATCTGCATTGGAACCATCTATTTAAACGTCGGAACCGGCTACAACTCCATTCTGGCGAGAGGTTCGTGTGCGTCGTTTGTGTTTGGGTTTGTGACGTTCATGTCGATCGGAGGGTTCCCGTCGTTTGTGGAGGACATGAAGGTGTTTCAGAGGGAGAGGCTGAATGGTCACTACGGAGTGGTGTCGTTTGTGATAAGCAACACATTATCAGCGATGCCGTTTCTGATACTGATAACGTTTCTGTCAGGAACCTTATGTTACTTCATGGTTAGGCTCCACCCTGGCTTCTGGCACTACGTCTTTTTTGTGTTGTGCCTTTATGCAAGTGTCACTGTTGTTGAGAGCTTGATGATGGCCATTGCTAGTATTGTCCCTAACTTCCTCATGGGTATCATCATTGGTGCTGGCATTCAGGGAATATTCATGTTGGTATCAGGCTACTTCAGGCTCCCACACGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTACAGGGCCAATACCAAAATGATCTGAAGGGGTTGATCTTCGACAACCGGACGCCGGAACTTCCAAAGATTCCGGGGGAGTACATACTGGAGAACGTGTTTCAGATCGACGTAAACAGATCGAAGTGGATCGATTTGATCGTGATCTTCTGCATGATCATCATATATAGGATCATATTCTTCATAATGATCAAGATCAACGAGGACGTGACCCCTTGGATTAGGGGTTACATAGCCAGGAGGAGAATGCAGCAGAAGAGTGCGACACACCAGAACACTACCATTGCTCCTGATGTTCTTACTCAGTCTCCTTCTCTTAGAACCTACATTACAAGCCAATCCAGTGGTGCTGCTGCTAGGAAAAGGTAA 2115 0.4861 MEIEASRAVGNNNHGTAAIPGLSPLSETLWRETKANVDFVGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSASLRMPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRMLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFQLTKRSFVNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTLCYFMVRLHPGFWHYVFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNRTPELPKIPGEYILENVFQIDVNRSKWIDLIVIFCMIIIYRIIFFIMIKINEDVTPWIRGYIARRRMQQKSATHQNTTIAPDVLTQSPSLRTYITSQSSGAAARKR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3418 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 290 IPR003439 GO:0005524
Alju02g3418 704 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
Alju02g3418 704 Pfam ABC transporter 69 218 IPR003439 GO:0005524
Alju02g3418 704 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Alju02g3418 704 SMART AAA_5 76 247 IPR003593 GO:0016887
Alju02g3418 704 FunFam ABC transporter G family member 11 41 284 - -
Alju02g3418 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 35 669 - -
Alju02g3418 704 CDD ABCG_EPDR 44 272 - -
Alju02g3418 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 284 IPR027417 -
Alju02g3418 704 Gene3D - 41 285 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3418 Alju-ChrAlju02 52194387 52199394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3418 77 278 Calmodulin-binding Proteins AT2G36910 31.455 1.42e-11 66.2