Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3394 ATGGATGAGTATCAAGAGATGGAGAGATTTGGTGTGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGCGAGTTCTACTACCGAAAGCGCAAAGAGAAGCGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATTCTAACAGAAAACACAGAAAAGATCGTGACTTATCAAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTTTCTACTGGAACTTTTATGCCTAATCAAGATGATACCCATTCTAAAGAACAGGTTGAAGAAAAAAATTATGCTAGTGAGGATAGGCTAGGTTTAGGTCTTGGTATGGGAACTACTAGCACTTCTGGTTCTGGGTTAGGTTTTAATAGTAGTCATCATGAAAATGCTTCTGATGATGATAATGATGATAACAATTTTTTGCCTACGGCATTTGGAAAGAAGATTAAGGAGGGAGCAATGAGAAAGGAGAGAGAAAGGGAGAGAGCAAAATTGGAAAAGAAGAGAGCTCAAGGAAAAACTCAAGCTCAAGATGAATTTTCAGATGTTGGGAAGTTTGAGAAACATACAAAGGGGATTGGAATGAAGTTGTTGGAGAAAATGGGATATAAAGGAGGGGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATTTGAGGGCTAAGAATACAGGCATTGGATTTAATGACTCAAAGGCAACAACTCCTTTGCCAAGTGTACAAGTTGAGACGACAGCATTGCCAGGAGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGAAATCAAGATCAAAGAAGAAGAAGGACGAGGATGATTATATTACTGCTGAGGAATTGTTAGCAAGCAATGAAGAACAGGGTCTGGAGGTTGTTCAAAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTGTCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATGTTCCAATGCCAGAGCTTCAGCATAATATGGGCTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGGAGAGAGAGGGAGACTGCCCTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGTAGCACACCAAAAAAAGCAGTTGGAAGATTTGGGGGAAATAGCAAATGTGCTGGACCGAGTCAGAGAAGGGAGCTTAATGGGGACATTGACGTTGGAGTTGCTTGCACAGTTCTTTGCTGACCTGCGGAAAAGATATGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTTGCTCATATGCTTTACCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCGAAATCCATCACATGGGTTAGAGTTGGTATCAAGGTGGAAAACATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCACCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATTAATACATGGCAGGCACGGGATCCTGAGCCAATGTTGCGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAGCCATGTTGGACAGTATAGTTATGCCAAAATTGGCAAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCTATCCACACTTGGGTGCACCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGCATGTATCAGATGATATGCTTCAAATTGAGTACTGTTCTTGGTGCTTGGCACCCAAGCGATGGCTCTGCTTATGCTATACTGTCACCTTGGAAAACTGTATTTGATTCAGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGCGCCAAAGTTGCAGTTTGTCTTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAAGTCATCTGATGGTTGATATAATGGAGAAGTTCTTCTTCGCCAAGTGGCTTCAGGTTTTGTATCACTGGTTGTGCTCAAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGTATTCGATATCAGCTAAACCGCGGTCTTGATATGATGAATCAGGCTGTTGAAGGTATGGAAGTGGTCCAACCTGACTTGAAAGAAAATATCAGCTATCTTAGGGTACTCGAGCAAAGGCAGTTTGAGGCTCAGCAAAAAGCAGCAGCTCATGCTCAAACCCAAGCTCCTTCAGGCTTTGGGGGTGCTGCCCATATGGATGGTGCAGCTGGTGTACATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCACAACAACATGGCTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATTTATGGGTTTGGTAATGTCAGCATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAACTGAGGATTTATGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAGTCCCTTGGTTGGAGATGA 2595 0.4154 MDEYQEMERFGVDNDFEGGEWIDGEFYYRKRKEKRTQTREDVLYGVFADSDDDEDDYSNRKHRKDRDLSKKPDLTKPVNFVSTGTFMPNQDDTHSKEQVEEKNYASEDRLGLGLGMGTTSTSGSGLGFNSSHHENASDDDNDDNNFLPTAFGKKIKEGAMRKERERERAKLEKKRAQGKTQAQDEFSDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATTPLPSVQVETTALPGVAQPTAVRAKERLWSKKSRSKKKKDEDDYITAEELLASNEEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNMGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLETEVAHQKKQLEDLGEIANVLDRVREGSLMGTLTLELLAQFFADLRKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSRWKTLLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDSIVMPKLASAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMICFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIAPKLQFVLQEFQVNPADQKLDQFYWVMNWASAVPSHLMVDIMEKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPDLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGFGGAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTEDLWSLESLQGLLELHNKSLGWR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3394 864 MobiDBLite consensus disorder prediction 45 189 - -
Alju02g3394 864 MobiDBLite consensus disorder prediction 115 132 - -
Alju02g3394 864 MobiDBLite consensus disorder prediction 155 189 - -
Alju02g3394 864 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 852 IPR045211 GO:0000390
Alju02g3394 864 MobiDBLite consensus disorder prediction 93 107 - -
Alju02g3394 864 PIRSF TFIP11 1 860 IPR024933 -
Alju02g3394 864 MobiDBLite consensus disorder prediction 54 73 - -
Alju02g3394 864 Coils Coil 350 398 - -
Alju02g3394 864 SMART G-patch_5 194 239 IPR000467 GO:0003676
Alju02g3394 864 Coils Coil 159 181 - -
Alju02g3394 864 Pfam G-patch domain 196 237 IPR000467 GO:0003676
Alju02g3394 864 ProSiteProfiles G-patch domain profile. 196 241 IPR000467 GO:0003676
Alju02g3394 864 Pfam GC-rich sequence DNA-binding factor-like protein 418 683 IPR022783 -
Alju02g3394 864 MobiDBLite consensus disorder prediction 76 92 - -
Alju02g3394 864 Pfam Tuftelin interacting protein N terminal 6 103 IPR022159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3394 Alju-ChrAlju02 51842109 51844703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3394 196 237 C2H2 Transcription Factor Family AT5G26610 47.619 2.58e-07 51.6