Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3374 ATGTTATCGGATTGTAAGTGCAGTTTTCTATCTCTGACGAATTTGAGCATCCCATATGGGGGAGTTGAAGCTGCTAGATGCCAAAACCGGGGATCAAAGTTTAAACTTGGCTGCTCTTTATTTGATATTTACTACTCCCTCCGTCACCCGAGAGCTGAAAATGTGAATAAAGGAGGGAAGGAAGAAAGATACCAATTGCATGGGTTCAATGCACCTTCTTCTTTTCACATTTGCGTCGACAAATTCCTTTTCTCTCTCAACCTCCCGTTTAAAAAGTCACCAAATGGGTTCAAGCAACGAATGAATGCATCAATTGTCAAACCCACCTCCTGCCACATTTATAAGATAGAGACCCTCTACACAGTTCTATCAAATATCGTTCTTTTGAGGAAGGTGAATTTGGTTCTAGGGCACGGAACGCGTCTTCTGTCTCTCGCCGCTTCGTCACTTGCTCTCTCCGCTCTACGGTTATTAAATTCTGATTGTTCAAAAATGGCCGATGCGCATGATACTGATAAGAATATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCGCGTGATCAGGTATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCGTCAAACATAAAAAGCAGAGTGAATAGGCAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTGTATAACAGGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGGACAATTGTAACAGAAGACGGAAAGGAGAAGAAGGTGACCATTGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAGTTTCATACAGAAGCTCTTAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTTATAATCATGGATGGGAATGGCACACTTTTTGGGACATTGAGTGGCAATACAAGAGAGGTGCTTCATAAGTTTAGTGTGGATCTGCCAAAGAAGCATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTAGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCTACACAGTTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTTCAGGTTTAATTCTTGCTGGTTCTGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAGATACTTAATGTTGTTGATGTATCTTATGGAGGGGAGAACGGCTTCAATCAGGCTATTGAACTATCATCTGAAATTCTGGCCAATGTAAAGTTCATCCAAGAGAAACGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGTAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCGCTGGAGATGGGTGCAGTTGAGACACTTATTGTCTGGGAAAGTCTGGATATAAATAGATTTGTACTGAAACACAGCACTAGTGGTGAAGTTATTATAAAACACTTCAACAAGGAACAAGAGGCCAACCAGGACAATTTTCGGGATCCTACTGGCAATGCTGAATATGAGGTTCAGGAAAAGATGACTCTTCTGGAGTGGTTTGCCAATGAGTACAGACGGTTTGGCTGCACTCTTGAGTTTGTCACTAATAAATCACAAGAGGGCTCGCAGTTTTGCAGGGGTTTTGGTGGTATTGGGGGGATTCTACGCTACCAGCTTGATATGAGGACATTTGATGACTTCTCTGATGATGAAAATGTGTATGATGACTCTGAATAG 1806 0.4247 MLSDCKCSFLSLTNLSIPYGGVEAARCQNRGSKFKLGCSLFDIYYSLRHPRAENVNKGGKEERYQLHGFNAPSSFHICVDKFLFSLNLPFKKSPNGFKQRMNASIVKPTSCHIYKIETLYTVLSNIVLLRKVNLVLGHGTRLLSLAASSLALSALRLLNSDCSKMADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWESLDINRFVLKHSTSGEVIIKHFNKEQEANQDNFRDPTGNAEYEVQEKMTLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDENVYDDSE 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3374 601 SMART eRF1_1_2 168 304 IPR005140 -
Alju02g3374 601 NCBIfam peptide chain release factor aRF-1 177 581 IPR004403 GO:0003747|GO:0006415
Alju02g3374 601 Pfam eRF1 domain 3 445 582 IPR005142 -
Alju02g3374 601 Gene3D - 443 601 IPR029064 -
Alju02g3374 601 Gene3D eRF1 domain 2 300 441 IPR042226 -
Alju02g3374 601 SUPERFAMILY L30e-like 442 584 IPR029064 -
Alju02g3374 601 Gene3D eRF1 domain 1 161 299 IPR024049 -
Alju02g3374 601 Pfam eRF1 domain 2 308 441 IPR005141 -
Alju02g3374 601 SUPERFAMILY Translational machinery components 306 440 - -
Alju02g3374 601 Pfam eRF1 domain 1 182 302 IPR005140 -
Alju02g3374 601 FunFam Peptide chain release factor subunit 1 443 601 - -
Alju02g3374 601 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 170 304 IPR024049 -
Alju02g3374 601 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 167 593 IPR004403 GO:0003747|GO:0006415
Alju02g3374 601 FunFam Eukaryotic peptide chain release factor subunit 1 166 299 - -
Alju02g3374 601 FunFam Eukaryotic peptide chain release factor subunit 1 300 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3374 Alju-ChrAlju02 51616964 51622252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3374 165 601 Eukaryotic Initiation Factors Gene Family AT3G26618 88.558 0.0 810