Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3359 ATGGAAATGCAGGACCAAATAGAAGGAACAAAGTTCAATAACTCTGGCAATGCTGGTAATAACCTTTCCAACAATGGCACAAAATCTGAAATTGTTGCCCTGTTGAAGGATCAAACTCCTAATGTAAACAACCATACTCCTAAGGTGAGGAAACCATATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTAGAAGCTTTGAAATTGTATGGTCGCGGTTGGCGGCAAATTGAAGAACACATAGGTACAAAGACTGCAGTTCAGATTCGAAGCCATGCCCAGAAGTTCTTCTCTAAGGTCGCCCGGGAATCTGATGGCACTGCTGAAAGTTCTATAAAACCAAGTGATATACCTCCTCCTCGGCCAAAGAGGAAACCTCTACATCCATATCCCCGTAAATCAGTTGATTCTGGCAAAAGACCATCCATAGCAAATGAAGTGGAAAAATCTCCATCCCCAAACCTGGTAGTTGCAGAGAAAGACACCCAATCCCCGACCTCTGTGCTATCTGCATTCAATTCAGAAGTATTTGGGTCAGCATCTTCAGAGCAGCCTAATAGATGTCAATCACCTAATTCTTGTGCCACTGACGTTCACTCATCCAACTTATCGCTATCACCCGTTGAAAAGGAAAATGATTGTATGACATTTGACTCCTCTGTGGAGGAAGAGAAAGGATCTCTTACATCACTCTCTTTATCTGCTGGTTTCAACTTACATGTGTTTTCAACGAAGTCTGAGTTGAGTTCCAAGGATACTGAATCTTCAATTGAAAATGCAACGAACATTGCCCATTTTACAAGTATTAAGTTGTTTGGAAGAACTATTCAGATGGTAGATAACTAG 867 0.4152 MEMQDQIEGTKFNNSGNAGNNLSNNGTKSEIVALLKDQTPNVNNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVARESDGTAESSIKPSDIPPPRPKRKPLHPYPRKSVDSGKRPSIANEVEKSPSPNLVVAEKDTQSPTSVLSAFNSEVFGSASSEQPNRCQSPNSCATDVHSSNLSLSPVEKENDCMTFDSSVEEEKGSLTSLSLSAGFNLHVFSTKSELSSKDTESSIENATNIAHFTSIKLFGRTIQMVDN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3359 288 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Alju02g3359 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Alju02g3359 288 CDD SANT 61 104 IPR001005 -
Alju02g3359 288 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Alju02g3359 288 SUPERFAMILY Homeodomain-like 53 108 IPR009057 -
Alju02g3359 288 SMART sant 58 106 IPR001005 -
Alju02g3359 288 PANTHER SWI/SNF COMPLEX-RELATED 33 256 - -
Alju02g3359 288 MobiDBLite consensus disorder prediction 107 169 - -
Alju02g3359 288 Gene3D - 61 108 - -
Alju02g3359 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Alju02g3359 288 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Alju02g3359 288 MobiDBLite consensus disorder prediction 125 142 - -
Alju02g3359 288 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Alju02g3359 288 MobiDBLite consensus disorder prediction 1 25 - -
Alju02g3359 288 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3359 Alju-ChrAlju02 51453364 51455606 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g3359 Myb_DNA-binding 7.9e-14 CL0123