Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3349 ATGGATAGTGATAATGGCCTTGACATGCGAAATTGGGGTTACTATGAACCCACAACTTCCTTTAAGAATCATCTTGGACTCCAGCTTATGTCGTCCATGCCTGAAAAACCCATGCTTGGAGGGCGCAGTGTTCCGGTTTTGTCTGGGAACAACAATGTGGCATTTCATCATAGGACCATTGGGATGCCACAAGCAACTTACCCTATGGATTACATGAGGGAAGCTTGGATTAGTCAAAGGGAGAAGTTTTTGAACATGATTCCGACAAACCCAACTAACTATGCTGTTATTCCAGAGACATCTTCAGCCCATCACATGCAGTTGGTTCAACCACCTGACTTGATGAAGGAAGAAAGACCGGTGGAAGAGGCACCTGCTGAGAAGATCAATGGCACTAGTAAGAAAAGGCAGGGTCCCAAGTTACCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGAGGACCTCGGGCACCGAAGGATGAGAATACTCTTTCAGTTCAACGAGCAAGGCCTCCGAAGAAAACTACTGAAATTGTAATAAATGGGATTGACATGGATATCTCAAGCATTCCTATTCCGGTTTGTTCATGCACTGGATCGCCTCAGCAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGCTGCACGACAAATATGTCAGTATATCCTTTGCCTATGAGCACAAAGCGACGTGGTGCTAGGATAGCTGGGAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATCGATTTGAAGACTTATTGGGCAAAGCATGGCACTAACAAGTTTGTCACTATCAGATCACTTTGGGGAAAATATGAAAATATGGGTAGGGTTTCTATGGTGAAATTGAGGGCAGAATCTTATGTTCTGTGTTTGGAATAA 930 0.4409 MDSDNGLDMRNWGYYEPTTSFKNHLGLQLMSSMPEKPMLGGRSVPVLSGNNNVAFHHRTIGMPQATYPMDYMREAWISQREKFLNMIPTNPTNYAVIPETSSAHHMQLVQPPDLMKEERPVEEAPAEKINGTSKKRQGPKLPKSPKAKKPKRGPRAPKDENTLSVQRARPPKKTTEIVINGIDMDISSIPIPVCSCTGSPQQCYRWGSGGWQSACCTTNMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIRSLWGKYENMGRVSMVKLRAESYVLCLE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3349 309 SMART GAGA_bind_2 1 282 IPR010409 -
Alju02g3349 309 MobiDBLite consensus disorder prediction 118 170 - -
Alju02g3349 309 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Alju02g3349 309 PANTHER - 1 282 IPR010409 -
Alju02g3349 309 MobiDBLite consensus disorder prediction 118 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3349 Alju-ChrAlju02 51395332 51396629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3349 1 282 BBR or BPC Transcription factor family AT2G01930 52.189 1.28e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Alju02g3349 GAGA_bind 2.8e-110 No_clan