Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju02g3346 | ATGTTAGCCAATAACTCTCTCACTTCCCTTCCTACTCCCGAGCCCTTTCCCTGCGCCGATAATGGCACCATCACGACCAACAAGAGAAAGAGAAGACCCGCCGGAACTCCAGATCCGGACGCGGAGGTGGTGTCGCTGTCGCCGAAGACGTTACTGGAATCGGACCGGTACGTGTGCGAGATCTGCAATCAGGGGTTTCAGAGGGACCAGAACTTGCAGATGCACCGCCGGAGGCACAAGGTGCCGTGGAAGCTCCTCAAGAGGGACACGCCGGCGGCGAGGAAGCGCGTGTTCGTCTGCCCCGAGCCCACGTGCCTGCACCACGACCCCTGCCACGCGCTCGGCGATCTCGTCGGAATCAAGAAACACTTCCGACGAAAACACAGCAACCACAAACAATGGGTCTGTCAACGTTGCTCTAAAGGCTACGCCGTTCAGTCTGATTATAAAGCTCACCTCAAAACTTGTGGCACCAGAGGCCACTCTTGCGATTGTGGCCGCGTTTTCTCCAGGGTGGAGAGCTTTATCGAACACCAAGATGCTTGTACCATGGGGCGGCTCCGGTCAGAAACACGGCCACTTCAGCAGCAGCCACCGACGGCGTGCCTGTCGCGAACCGCTTCGAGCCCGAGTCCGTCGAGCGAAACCAATTTCAGCACTGGTCTAGTGTTGCCTAATAATAAGCCGACGACGACGGCTGAACCGGCGACAATATTATTGTTGAGCCCTACCATTAATAATAATAATATTAGTGTTGATCATGAAACCTCATCGAGCAACAAGTATAATAAACTGTGTCCAAACTTGGATCTTCGTCTCTCTACCGCCACCTCTACTTCCATGATTCCATCTATTGATACTAATGCTTCGCACCCCAATAAGAGAGATCATGAAAGCCGTTCGAACCACTTTCGGATTTTGATCGGGTCGTCGTCGTCGTCGGAGAAGGGCCAAAAAAATGAATCCAACGGCTGCTTCAATATTATTAATAATCGCAGGAATAATTCACCCAAGGAACGCAGTAACAGCAGCCATAAACCAGAAGGTACTAATGGAGGGATGAGGGTGGTTCATGAAGGAGAAGAAGAAGCTCGAGAGCAATTGAGGTTAGCCATGGCGGAGAAGGCATATGCAGATGAAGCAAGGAAGCAAGCAAAACGACAGATAGAAGTTGCAGAGAAGGAGTTTTCTAATGCAAAAAGCATAAGACAGGAAGCTCAAGCTGAGCTCGAAAAAGCCTACGCCATTAAACAACATGCCATCAAACAGATCAACTCTCTCATGCTTCAAATCACTTGTCATGCTTGTAAACGACAATTTTCAGCCCAAACGACACGCACCACCACCACCACAATGATCACGCCGTTGGCGGTTCCTCCGCCGCCACTGGACGAGAACTCCTTGGCAGTCAGCTACATGTCATCTGCTTTAACAACTGAAGCTGGCGAGGAAGAGAACTACAATAATAATAGTAATGAGAAAAATCGTGGCAAAAACAGTAACTCTTTATCATCTCTCTAG | 1521 | 0.5016 | MLANNSLTSLPTPEPFPCADNGTITTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDTPAARKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCQRCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTMGRLRSETRPLQQQPPTACLSRTASSPSPSSETNFSTGLVLPNNKPTTTAEPATILLLSPTINNNNISVDHETSSSNKYNKLCPNLDLRLSTATSTSMIPSIDTNASHPNKRDHESRSNHFRILIGSSSSSEKGQKNESNGCFNIINNRRNNSPKERSNSSHKPEGTNGGMRVVHEGEEEAREQLRLAMAEKAYADEARKQAKRQIEVAEKEFSNAKSIRQEAQAELEKAYAIKQHAIKQINSLMLQITCHACKRQFSAQTTRTTTTTMITPLAVPPPPLDENSLAVSYMSSALTTEAGEEENYNNNSNEKNRGKNSNSLSSL | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju02g3346 | 506 | Gene3D | Classic Zinc Finger | 35 | 99 | - | - | |
Alju02g3346 | 506 | SMART | c2h2final6 | 98 | 128 | IPR013087 | - | |
Alju02g3346 | 506 | SMART | c2h2final6 | 134 | 161 | IPR013087 | - | |
Alju02g3346 | 506 | SMART | c2h2final6 | 57 | 79 | IPR013087 | - | |
Alju02g3346 | 506 | FunFam | protein indeterminate-domain 12-like | 36 | 104 | - | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 282 | 301 | - | - | |
Alju02g3346 | 506 | Coils | Coil | 375 | 423 | - | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 310 | 337 | - | - | |
Alju02g3346 | 506 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 57 | 79 | IPR013087 | - | |
Alju02g3346 | 506 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 23 | 484 | IPR031140 | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 310 | 356 | - | - | |
Alju02g3346 | 506 | Pfam | Zinc finger, C2H2 type | 57 | 79 | IPR013087 | - | |
Alju02g3346 | 506 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 59 | 79 | IPR013087 | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 190 | 230 | - | - | |
Alju02g3346 | 506 | MobiDBLite | consensus disorder prediction | 479 | 506 | - | - | |
Alju02g3346 | 506 | SUPERFAMILY | beta-beta-alpha zinc fingers | 54 | 80 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju02g3346 | Alju-ChrAlju02 | 51356827 | 51359988 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju02g3346 | 4 | 478 | C2H2 Transcription Factor Family | AT1G25250 | 44.813 | 5.46e-119 | 353 |