Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3336 ATGGTGTTAGGGTGGAGCCGAAGAAAGAACAAGAACAGAAATCTCAACCTGGAGCTTGTAACTCCAAACCAATTCATTTGTCCTGTTTCTCTTGATTTGATGAAAGATCCGGTCACGTTATCAACCGGAATCACCTACGATCGCGCTAGCGTCGAGCGGTGGCTCGACGATGGGAATTTCACGTGTCCTGTAACGAATCAGATTCTCACCAGCTTCGATCTCGTTCCCAATCAATCGCTTAGGGTTATGATTCAGGATTGGTGCGTTGAGAATCGCCGATTCGGAATCGAGAGGATTCCAACTCCTAGAATACCTGTTAGTTCAACGCAAGTCGAAGAGATTCTTCTTCATCTTCATTCCTCGGCGTCGCGTTTCGATCGGTATGGTTTTCTGCAAGGTGTTCGGAGAATCAAGGAATGGTGTTCCGAGAGCGAGAGAAACAGAAGGTGTATTGTGGACAATGGTACTCCTAGTGTATTAGCTTCCGCATTTCGTGAATTTACGATTGATTCGATTGAGCAAAATGTGAGTGTTCTGGAGGAGATTTTGAATGCCCTAAATTGGATGCTTCCGCTGCAATTCGAAGCCCAGAAAATCTTGCAATCTTCAGATTCCTTGCGTTGCTTGGCTTGGTTCCTGAAGAATCAAGATCTTTCCGGAAAACAGAATGCCATTGTTGCTTTGAGAGAGATCCTTTCTTCTGGCGATGAACAAACTTTTGAGACCATGGCAGAAATCGAAGGGACAACTGAGCTATTAGCGGAGTTCATTAACAAGAGAATTAACCCAACAATCACGAAAGCTTCAATGGTGATTATTTATTACTTGGTTTCATCTTCTTATCCATCAAGTGAGAAGGTGAAGCTAAAATTTATAGGCCTTGGTTTGATCTCTTCACTTCTGGAGATCCTAATTGATGCAGACAAGAGTCTATCTGAGAAGGCTTTAGGTGTTTTTGATTCACTCTGTGACTGTCAAAAAGGAAGAGAAAGAGCTTTCAGTAATGCTCTAACAGTTCCTGTTTTGGTAAAGAAGATTTTGAGGGTTACAGCTTCAGCAACAGATCACTGTGTATCTTCTATTTGGAAGTTATGCAGATATGGATCTAAAGATGATGAAGAAGAAGATGAAGTAGAACCAGCTCTGACCGAAGCACTTCAAGTTGGTGCATTTCAGAAGCTGTTGGTGGTTTTGCAGGTTGGTTGTGGCGATGAAACGAAGGAGAAAGCAACAGAGCTTTTGAAATTGTTCAATCCTTATAGGGCTGGCTTGGAATGCATAGATTCAGATTTCAAGAATCTCAAGAGATCATGTTGA 1317 0.4244 MVLGWSRRKNKNRNLNLELVTPNQFICPVSLDLMKDPVTLSTGITYDRASVERWLDDGNFTCPVTNQILTSFDLVPNQSLRVMIQDWCVENRRFGIERIPTPRIPVSSTQVEEILLHLHSSASRFDRYGFLQGVRRIKEWCSESERNRRCIVDNGTPSVLASAFREFTIDSIEQNVSVLEEILNALNWMLPLQFEAQKILQSSDSLRCLAWFLKNQDLSGKQNAIVALREILSSGDEQTFETMAEIEGTTELLAEFINKRINPTITKASMVIIYYLVSSSYPSSEKVKLKFIGLGLISSLLEILIDADKSLSEKALGVFDSLCDCQKGRERAFSNALTVPVLVKKILRVTASATDHCVSSIWKLCRYGSKDDEEEDEVEPALTEALQVGAFQKLLVVLQVGCGDETKEKATELLKLFNPYRAGLECIDSDFKNLKRSC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3336 438 Pfam U-box domain 22 92 IPR003613 GO:0004842|GO:0016567
Alju02g3336 438 CDD RING-Ubox_PUB 22 74 IPR045210 -
Alju02g3336 438 FunFam RING-type E3 ubiquitin transferase 21 92 - -
Alju02g3336 438 SUPERFAMILY RING/U-box 21 97 - -
Alju02g3336 438 SUPERFAMILY ARM repeat 134 414 IPR016024 -
Alju02g3336 438 PANTHER WDSAM1 PROTEIN 20 418 IPR045185 GO:0061630
Alju02g3336 438 Gene3D - 109 416 IPR011989 -
Alju02g3336 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 96 IPR013083 -
Alju02g3336 438 SMART Ubox_2 24 87 IPR003613 GO:0004842|GO:0016567
Alju02g3336 438 ProSiteProfiles U-box domain profile. 20 94 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3336 Alju-ChrAlju02 51261479 51262795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3336 2 436 U-box Gene Family AT5G37490 42.237 2.53e-106 320