LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g3330	ATGGCCGTCGTCCGTCAACGCCGGCAACTCAACCTTTCGTTAAAGCTGCCGGATCCCTCCGACTGCCGCCGTCTCTTCCTCCTCCCCACCACTTCCTCCTCCTCCGCCTCAGACATCACCCTTAACGACATCGAAAAGCTTGAAGTTCTTGGCCACGGAAATGGTGGTACAGTCTATAAGGTTCGACACAAGCGAACCTCTGCTATCTACGCCCTGAAGGTCGTCCACAACAGCTCCGACCCGATAAGCCGCCGGCAAGTCCGGCGAGAGATGGACATCCTCCGACGAACGGACTCGCCGTACGTAGTACAATTCCACGGTTTCTTCGAGAAGCCGTCCGGTGACGTAGCGATTTTGCTAGAGTACATGGAGCTGGGGACGCTGGACACACTATTAAAGAACAACGGCACCTTCTCTGAATCCCAACTCGCCACGGTGGCGCGTCAAGTTCTCAACGGGCTGAGCTACCTCCACGCGAATAAGATCATCCACCGTGATATCAAGCCATCGAATCTTCTGGTGAATCGGGATATGGAAGTAAAGATCAGTGACTTCGGAGTGAGCAAGGTCATGTGCCGGAAGTTGGACGCGTGTAATTCATACGTGGGTACATGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATCGATATGGAGGGAATTATGACGGGTATGCGGCTGATATATGGAGCTTGGGTCTCACGTTGTTCGAACTCTATGTGGGTTATTTTCCGTTTCTATCGGAGGGTCAGAGACCCGATTGGGCCGCCTTGATGTGTGCCATTTGTTTTAGTGATCCACCTTCCTTGCCGGCGAGTGCTTCCGGCGAGTTTCAGAGTTTCATGGAGTGTTGCTTGAAGAAGGAATCAAATGAGAGGTGGACGGCGGCTCAGCTTTTGACCCACCCGTTTTTATGTCAGCAATAA	927	0.5329	MAVVRQRRQLNLSLKLPDPSDCRRLFLLPTTSSSSASDITLNDIEKLEVLGHGNGGTVYKVRHKRTSAIYALKVVHNSSDPISRRQVRREMDILRRTDSPYVVQFHGFFEKPSGDVAILLEYMELGTLDTLLKNNGTFSESQLATVARQVLNGLSYLHANKIIHRDIKPSNLLVNRDMEVKISDFGVSKVMCRKLDACNSYVGTCAYMSPERFDPDRYGGNYDGYAADIWSLGLTLFELYVGYFPFLSEGQRPDWAALMCAICFSDPPSLPASASGEFQSFMECCLKKESNERWTAAQLLTHPFLCQQ	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g3330	308	FunFam	Mitogen-activated protein kinase 2	125	308	-	-
	Alju02g3330	308	Gene3D	Transferase(Phosphotransferase) domain 1	126	308	-	-
	Alju02g3330	308	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	162	174	IPR008271	GO:0004672\|GO:0006468
	Alju02g3330	308	SUPERFAMILY	Protein kinase-like (PK-like)	41	306	IPR011009	-
	Alju02g3330	308	ProSitePatterns	Protein kinases ATP-binding region signature.	50	73	IPR017441	GO:0005524
	Alju02g3330	308	FunFam	Mitogen-activated protein kinase kinase 1	27	124	-	-
	Alju02g3330	308	Pfam	Protein kinase domain	45	305	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g3330	308	SMART	serkin_6	44	305	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g3330	308	ProSiteProfiles	Protein kinase domain profile.	44	305	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g3330	308	CDD	PKc_MAPKK_plant_like	42	305	-	-
	Alju02g3330	308	Gene3D	Phosphorylase Kinase; domain 1	20	124	-	-
	Alju02g3330	308	PANTHER	MITOGEN-ACTIVATED KINASE KINASE KINASE	31	307	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g3330	Alju-ChrAlju02	51195076	51196002	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g3330	1	305	MAP Kinase Kinase Gene Family	AT1G73500	61.935	1.16e-131	375

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Alju02g3330		Pkinase	1.5e-66	CL0016