Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3329 ATGAGTGGTGATAAAAGAGAAGAATATTCTGTATTATGTGAGAAAGATGAAGAAGATGAAGTAGATAATATTGAAGAGAAAGATAATGAGGTCCTCAAGAGCAGAATTTCTAACCATCCTCTCTATGATCTTCTCGTTGAACAACACCTCAACTGTTTGAAGGTGGGTGACATTTCCAACCTAGAAAAAGTGAAGAAGAAGATAGATAGACAGACGAAAGCAATGAAGAAGCAAAACCTTGGCATGTTTAATCATTCAGAGCTGGATCACTTCATGGAAGCATATTGTAAGGCACTAGGGAAGCTGAAAGAAGCAATCGAGGAGCCTCAAACAGAGTCATTGGCTTTCATCAGCAACATGCATTCTCAACTCAGAGACCTTACTTCTCATGAATTAACTTCTACTTCCAAACACAGCCTTGATGATAGCATCTGA 435 0.3862 MSGDKREEYSVLCEKDEEDEVDNIEEKDNEVLKSRISNHPLYDLLVEQHLNCLKVGDISNLEKVKKKIDRQTKAMKKQNLGMFNHSELDHFMEAYCKALGKLKEAIEEPQTESLAFISNMHSQLRDLTSHELTSTSKHSLDDSI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3329 144 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 10 130 - -
Alju02g3329 144 SMART KNOX1_2 30 70 IPR005540 GO:0003677|GO:0005634
Alju02g3329 144 SMART KNOX2_2 78 129 IPR005541 GO:0003677|GO:0005634
Alju02g3329 144 Pfam KNOX1 domain 32 56 IPR005540 GO:0003677|GO:0005634
Alju02g3329 144 Pfam KNOX2 domain 86 128 IPR005541 GO:0003677|GO:0005634
Alju02g3329 144 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3329 Alju-ChrAlju02 51185106 51186867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3329 31 136 Homeobox Transcription Factor Family AT1G70510 32.743 5.15e-13 62.8