Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3310 ATGAATTCGAATTATGGCAAACCCAATAATCAAACGAGTGCTCCGTCTGCCTCACTGAAGAACTTCAAGTTCGACTTTGATCTCGGGATCGGATCCAATAAACCAAAATCTCTGAACGATCAGAAAAACCCAAAATCGACCCATCCATATTCTTCTTCCTCATCTTCATATTCATCTGCGCAACCCAGACCCTCGTGGCAACCCAACAAGCCATCATGGACTCACCAGCCTGCACCGAATCTGGCGAACCAGTGTGGATTGCCGGGTGGACCCACTTCAACGGTGGGAGATATCTTTGGCAAGAATTGGGGGTCTACACAACCTTCGGGTTCTAGTTCGACCGTTGGAATTGTTAATAAAAACCCTAATCTCTTTGGAGATTTGGTGACCTCTGCAATGGGACAGAGTTCTAAGAGTAGCAGTGATACTCCTATAAATTCGATTCCTGTTTCTAAGGCGTCAAGTACTACATCGAACAAGAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCTAAAACTAGTAACACGACGACGAGTAGTGGAGGTTGGGGATCTTCCGGGTACAATACTACTAGTATGGGCGCTAATAAAACCCCAAATCTTGGTGGTCCTTCAATGAGAAGTATGAATAGTGGTAGTTCAGCTGAAAGTGGAATGAATGTTAATAGGGATCCATTCAGCTCTTTGGCTGGATTTGGATCAAAACCATCTGGTAGTCTTAATTCAGCTGGAATAGCCGCAAGAAATAATAAAGCAGAGGATGATGGTTTTGGGGATTTCCGGAAAGCTTCCAAACCAGCCTCTACAACATTCCCATCAAGCACTTCTGCTGTAGATAATACCAGTTTTACAGGATTTACCAATGTGAATGAGAACCCTATGCAGACATCTGCTGGTTGTGACCCTATAGACATGTTGTTCTCATCTTCATCAGCTTCTGCTGGAAGTGCTCGGGTGACTTCCAAAGGATTTGGAGGAAAATTATCTTCTGACATTGATGATTGGGGTTTGGATTCTGAATTTGGTGGAGGAGGACATGATGATGGTGTTACAACCACGGAGCTTGAAGGGCTTCCACCTCCTCCTCCTGGACTATCGGGTTCTACGGCAAAAGGTAAAGGGATGGACAATTACAAGCAAGGTCAATTTGCAGATGCTATTAAGTGGCTATCTTGGGCTGCCATCCTTCTTGAGAAAACAGAGGATAATGCTGGTATGACAGAGGTGATGTCATGCAGAGCCTCATGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCCGATTGTACAAAGGTGCTAGAAAACGATGACGCAAATGTATCTATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCAGAAGATCTGAGGACTGTTCTAAAGATTGATCCTGGTAATAGGGTTGCGAGAAGTACCATTCATCGGCTGACAAAGCTGGCTGATTAG 1476 0.4444 MNSNYGKPNNQTSAPSASLKNFKFDFDLGIGSNKPKSLNDQKNPKSTHPYSSSSSSYSSAQPRPSWQPNKPSWTHQPAPNLANQCGLPGGPTSTVGDIFGKNWGSTQPSGSSSTVGIVNKNPNLFGDLVTSAMGQSSKSSSDTPINSIPVSKASSTTSNKSSFSMGNMADALPKTSNTTTSSGGWGSSGYNTTSMGANKTPNLGGPSMRSMNSGSSAESGMNVNRDPFSSLAGFGSKPSGSLNSAGIAARNNKAEDDGFGDFRKASKPASTTFPSSTSAVDNTSFTGFTNVNENPMQTSAGCDPIDMLFSSSSASAGSARVTSKGFGGKLSSDIDDWGLDSEFGGGGHDDGVTTTELEGLPPPPPGLSGSTAKGKGMDNYKQGQFADAIKWLSWAAILLEKTEDNAGMTEVMSCRASCYKEVGEYKKAVADCTKVLENDDANVSILVQRALLYESMEKYKLGAEDLRTVLKIDPGNRVARSTIHRLTKLAD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3310 491 SUPERFAMILY TPR-like 373 483 IPR011990 GO:0005515
Alju02g3310 491 MobiDBLite consensus disorder prediction 34 90 - -
Alju02g3310 491 MobiDBLite consensus disorder prediction 29 118 - -
Alju02g3310 491 PANTHER OS03G0340700 PROTEIN 1 491 - -
Alju02g3310 491 MobiDBLite consensus disorder prediction 132 224 - -
Alju02g3310 491 MobiDBLite consensus disorder prediction 341 374 - -
Alju02g3310 491 Pfam Tetratricopeptide repeat 445 475 IPR019734 GO:0005515
Alju02g3310 491 MobiDBLite consensus disorder prediction 98 118 - -
Alju02g3310 491 Gene3D Tetratricopeptide repeat domain 369 490 IPR011990 GO:0005515
Alju02g3310 491 SMART tpr_5 443 476 IPR019734 GO:0005515
Alju02g3310 491 SMART tpr_5 409 442 IPR019734 GO:0005515
Alju02g3310 491 SMART tpr_5 369 402 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3310 Alju-ChrAlju02 50923866 50925783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3310 384 486 Calmodulin-binding Proteins AT3G25230 31.132 1.40e-08 55.5