Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3305 ATGGCGACGGAGCAGTTGATGTCTGGTGGTGGTCCCCGCTACGTTCAAATGCAATCGGAGCAGTCGACGGCGATTTCTTCTTCTTCGTCATTCCGGTTTGGCGGTGGCCCTGAGCCTACTCGAATTTTCGATGAGTTGCCAGAAGCCACCATCGTCTCCGTCTCTCGTCCCGATGCCGGCGACATCAGTCCCATGCTTCTTTCTTACACAATTGAGTTTCGTTATAAACAGTTCAAGTGGCAATTGGTGAAGAAGGCTTCTCACGTATTTTATTTGCATTTTACATTGAAGAAACGTGTCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGGAGAACACACTGCTGTGGTGCAAGATGATGATGAAGCTGATGATGAAACTGTTCATCTACATCATGATGAAAGTGCTAAGGACAGAGATGTACCATCTAGTGCTGCTCTACCAATTATACGGCCAGCCATAGGTAGACAGGATACTATGTCAGACAGAGCAAAGACTGCAATGCAAGGATATTTGAATCACTTTTTAGGGAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCACAACTGAGTATGGCCCTAGCCTGAAGGAAGATTATGTGATGGTTAAGCATCTGCCAACAGTTCCTAAGGATGATGATTCCAGAAAATGTTGTTTATCTCGATGTTTTAGTTGTTGCAATGACAACTGGCCGAAGGTTTGGGCTGTCCTAAAACCTGGATTCTTGGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGACATAATTGTTTTTGATGTTCTCCCTGCCTCAGATGGGAATGGGGATGGTCGTTTATCACTGGCAAAAGAAATAAAAGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAAACCGGAGCATTAGGATAAGAGTAAAAAGTAGTGGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGTCTCAGGCCTCCTGAAGGATGGTGTCATCCTCATCGCCATGGTTCATTTGCTCCTCCAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTTGACGGCAGGGCAGCATTTGAGGCCATAGCTTCTTCAATTGAGGATGCTAAATCAGAGATATTTATTTGTGGGTGGTGGGTTTGCCCGGAACTGTATTTGCGGCGTCCTTTTCATACTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATCTACATTCTTCTATATAAAGAGGTGGCTCTTGCTTTGAAAATTAACAGCGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAAAATGTGAGGGTACTACGCTATCCTGACCACTTTTCTTCTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTTATTGTTGATCACCATATTTGTTTTATTGGAGGATTGGATTTATGCTTTGGTCGTTACGATACATCTCAACACACAGTGGGAGATTCCCCTCCCCTGTTATGGCCAGGAAAGGACTATTATAATCCTAGGGAATCCGAGCCAAATTCATGGGAAGATGCAATGAAAGATGAATTTGATCGGGTAAAATATCCTCGAATGCCATGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCAAATGAGCAAGCAATTCCATTACTCATGCCCCAGCATCATATGGTTATCCCACACTACTTGGGAAGAAGCAAAGAGGTGGAGATTGAAAGCAAGAACACTGACTATCATCTAGGCATGAAGAGGGAAGATTCCTTTTCCTCATCCCAAGATGTTCCTCTCCTTTTACATGAGGACTCTGGTGGGAGGGATGCTCCTGTAGGAGACACAGCATTAAATGAGTTAAACTCCTTTTTACATCACCTTGACCAGCCAACCAGGGTCAGCAGTGGTCGTCCTTTTTCTTTCCGGAAGGCCAAAATTGAACCAATAGGTCCAGATACACCGATGAAGGGCTTTGTAGATGATCTTGACTCAGTGGATCATCATGAGAAGATGCCTATGGATAGAGTAGCTCACTTTAGTGTACACAATTCGGGTCCAGAATGGTGGGAGACACAAGAACGTGGTGACCAAGGAAGTTTTGCAGATGAATCTGGCGAAGTTGGTCCTCGTGTATCCTGCCGTTGTCAGGTTATTCGGAGTGTTAGTCAATGGTCTGCTGGAACTAGCCAAACAGAAGAGAGTATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACGAAATCGTGTTTTGGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGACAAAAAATCATTTAGGGTCATAATTGTCATACCCCTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGCGGTGCAGCATCTGTCAGAGCAATAATGCATTGGCAGCATCGAACTATTTGCAGAGGACAAAACTCTATATTACATAATCTATTAGAATTTCTTGGTTCAAAAATACATGATTACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCTTTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGACTGTACAACTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGACAAAGAATTGATCGATTCTTTTATGGGGGGGAAATCATGGAAAGCAGGAAAATTCTCTCTAACTCTGCGGTTGTCATTATGGTCTGAACACTTGGGCCTGCAAGCAGGGGAGATCAATCAAATAATGGACCCAATTGCTGAGTCGACATATAAGGATATTTGGATGGCGACAGCAAAGACAAATACTGCAATTTATCAGGATGTTTTTTCTTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGGCAAAGCACAGCTATCTGGAAAGAAAGAATTGGCCATACTACCATTGATTTAGGGATAGCCCCAGAAAATTTAGAATCCTATCAAGATGGAGGTACCAAGAAAACTGACCCTTTGGAAAGATTGGCATCAGTGAAGGGTCATCTTGTTTCCTTTCCCTTGGAGTTCATGTGTCAAGAAAATCTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTACTCAGGTTTTCCATTGA 3333 0.426 MATEQLMSGGGPRYVQMQSEQSTAISSSSSFRFGGGPEPTRIFDELPEATIVSVSRPDAGDISPMLLSYTIEFRYKQFKWQLVKKASHVFYLHFTLKKRVFIEEIHEKQEQVKEWLNNLGIGEHTAVVQDDDEADDETVHLHHDESAKDRDVPSSAALPIIRPAIGRQDTMSDRAKTAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTTEYGPSLKEDYVMVKHLPTVPKDDDSRKCCLSRCFSCCNDNWPKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEIKERNPLRHSFKVTCGNRSIRIRVKSSGKVKDWVAAINDAGLRPPEGWCHPHRHGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHHICFIGGLDLCFGRYDTSQHTVGDSPPLLWPGKDYYNPRESEPNSWEDAMKDEFDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGRSKEVEIESKNTDYHLGMKREDSFSSSQDVPLLLHEDSGGRDAPVGDTALNELNSFLHHLDQPTRVSSGRPFSFRKAKIEPIGPDTPMKGFVDDLDSVDHHEKMPMDRVAHFSVHNSGPEWWETQERGDQGSFADESGEVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYHDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQHRTICRGQNSILHNLLEFLGSKIHDYISFYGLRAYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKELIDSFMGGKSWKAGKFSLTLRLSLWSEHLGLQAGEINQIMDPIAESTYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSTAIWKERIGHTTIDLGIAPENLESYQDGGTKKTDPLERLASVKGHLVSFPLEFMCQENLRPAFNESEYYATQVFH 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3305 1110 SMART PH_update 216 344 IPR001849 -
Alju02g3305 1110 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Alju02g3305 1110 PIRSF PLD_euk 50 622 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju02g3305 1110 PIRSF PLD_euk 610 1110 IPR016555 GO:0004630|GO:0006654|GO:0048017
Alju02g3305 1110 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Alju02g3305 1110 SUPERFAMILY PH domain-like 248 340 - -
Alju02g3305 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Alju02g3305 1110 Gene3D Endonuclease Chain A 701 968 - -
Alju02g3305 1110 Pfam PLD-like domain 780 956 IPR025202 -
Alju02g3305 1110 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Alju02g3305 1110 SMART pld_4 907 934 IPR001736 GO:0003824
Alju02g3305 1110 SMART pld_4 477 504 IPR001736 GO:0003824
Alju02g3305 1110 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Alju02g3305 1110 CDD PH_PLD 193 340 - -
Alju02g3305 1110 Gene3D Endonuclease Chain A 364 600 - -
Alju02g3305 1110 SUPERFAMILY Phospholipase D/nuclease 327 596 - -
Alju02g3305 1110 SUPERFAMILY Phospholipase D/nuclease 749 957 - -
Alju02g3305 1110 Gene3D - 244 342 IPR011993 -
Alju02g3305 1110 FunFam Phospholipase 741 961 - -
Alju02g3305 1110 PANTHER PHOSPHOLIPASE D 167 1100 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3305 Alju-ChrAlju02 50819978 50835985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3305 1 991 Phospholipase D Gene Family (Wang group) AT3G16785 71.825 0.0 1400