Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3289 ATGGGAGTGAAGGGTCTCTGGGAACTTCTTGCCCCAGTTGGTCGTCGGGTCTCCGTCGAGACCCTTGCCGGGAAGAAGCTCGCCATTGATGCGAGCATATGGATGGTTCAGTTTATGAAGGCCATGCGGGATGAGAAGGGAGAAATGGTTCGCAATGCTCATTTGCTCGGCTTCTTTCGCCGAATTTGCAAGCTTTTGTTCCTCCGGACTAAGCCTGTTTTTGTCTTTGATGGCGGCACGCCTGTTCTCAAGCGACGGACTGTGATTGCGCGTCGGAGGCAGCGCGAAAATGCTCAGGCCAAAGTTCGAAAGACTGCCGAGAAATTGCTTCTCAATCATTTAAAGGCATTGAAGTTGAAAAAACTTTCAGATGATGTCAAAAACCAGAGGTTGAAGCAGAATGGTGAAGCTAAGGGTCAGAAAAAATCAGTTCAGGTGGACTTAACTGGCTGTGATTTAGGAAGAACAAATGAAAAAGAGCAAGATAAAACATGTGAAGCTGAAGTGGACAAGAATATATCCAAGGCTAGTGTATCTACAAGTTGCAATCAGGAGGATCTTGATGCAATGTTGGCAGCGTCTATTGTTGCAGAGGAAGATGAATTATTAGCTGGTAAAGCAACATGTGGTGTAATCAGTCTCTCTGAGGAGGAAGATGATACAGATCCAGAAATAACATTGCCAGCGTTAGGTGCTGAAGTTGATCTATCTGTGTTAGCTGCTTTACCGCAGTTGATGCAACTTGATATTCTCTCTCAGCTTAAAGGGAAAAAGGTAGAAGGACCACTGAAGCATTCTAACAACAAGAAACAATTTGAGGTCAGTGAAAAGGACAGGGGCAAGGGTAAGGGAATTCTGTTGCATGAAGTCGACACAGTAGGATGTAGGTCAAGCAGTGATGATATGGTGGCAAAGAAATACAATCAGGACAAAGTGGATGAAATGTTGGCTGCATCTATTTGGGCTGAGGAAAATGAAAAGTTAGTAAACAATGCATCAGCATCTGGTGGGCCTTTCATTTTTGAGGAAGAGGATTTCATTAATGATGAAGACGAAGAAATGATCTTGCCAGCAATGCAAGGTAAGGTTGATCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTTGACCTTCTTGGTCAGATGAGAGAGGGACTGATCGCAGAGAACAGACAGAAGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCTGAATTACAAATACAGGCTTACCTTAAAACTGTTGCTTTTCGTCGGGAGATAAATGAAGTGCAGAAAGTTGCTGCAGGGGGGGTGGTAGGCGGTGTACAGACTTCTCGTATTGCATCTGAAGCCAACAGAGAGTATATATTTTCCAGATCTTTTACTGGTGATAGACAACAACTTACTTCTACCAGCTTAGAGAAAAATAAAAACACACATCAGAAGACTCTAGGAAACCATTTTTCTCAGGGTTTTGTGAATAACAGTGATCCTGCCAATGATTCTAGTCCCTCAAGTGGGTTAGTTTGCAATGAAGCTGGAAGTCCATCTGATGAGAATATCCAAACTTATCTGGATGAGAGGGGCCAATTTCGTGTTAGTAGACTTAGAGCTATGGGGATGCGTATGACCCGTGACATACAACGAAATTTGGATCTGATGAAGGAGATTGAGCAGGAAAGAACAGTTGTAAATAAGGCAGCAAATAATAACGCAATTCTTAGTGGGGAGAAAAATGTTGCATCGAAAGCTTCTAGCAACCTGCTTGTTGATACATCTGACGGATCAAATGTTGACTTAGTTGGAGATAATTCAAGAAATGAACAACACCCTGCATTAGCAGGGGATGCTTCTTTAGAGATATCTTTCATGGATGATGGTTATAACAAGTGCCTTAATGATGACGATGATGATTTATTTGCTAGTTTAGTAGCAGGTAATTCAGCAGCATTTTCTAGTTCTGACAAGAACTCATTGAAGGAACAAGTTTCTGATTCTAGTTCTGATTGTGACTGGGAAGAAGGAATTGTTGAAGGTAAAAGTGATGTTCATGTGGAAATAAAATCACCTGTTTCAAAAGATAATTATAATGATGAGTCTGATGTAGAATGGGAGGATGGAGTTTGTGATGATGCCAACACAACAGTGTGTGCAGCTGAGGCACAGAAAAAAGCATCTCGAGGTTGCTTGGAGGAGGAGGCTGACTTACAGGAGGCAATACGGAGAAGCCTGGAGGTCATGGGGGACTGCAAACTTAATGGTGCACCATCCAGGCATGAGTGCTCAAATGCTGATGGGGACAGATCAGATTATGCATTAAACCAAGATGATAATTTGGTTGATTCTGGAGTGAAGAGTATTTGTGGCAATTTTGGAGCAGCGAAGAGAGACACTGGAATGGGTGAGTCCACTTTGCATGGGGAAGGTAACACTGAACACACAGAATCAAATTATAAAATTATAGATGATACGATGGATGGCACAGTGAGAAGTAATAAACAAGTTTCCCAGTCTCCTGAGGGACAGTCAAAGTCATCTGTGGCGTTTGATTCTGAGAAGACAGTGTCATTTATTAAGAAGCCTCATTCAATGGAGATAGGATCACATTATGAAGATTTGTTGACCACTGCAGATGAAAGTAGGAGGAATGAGATTCACATGGCTGCAGAGCAGCTCTTGGGTACCTTAAATGAGGATGGCAAGGTGTTTGCCAATGGTAACAAGTCTCCTGTAGCTGACTCCCTCGGTGCTTCAAAAGAGGAGAAAAAGAACTGCAGTTATGAAGCTGAACCTTTTGGTAACTATTCTGAGAAGCCTGAGCCTGTTGCTCCTTTTGTGGATTCCTCCTCGGAAGGATTAACAGAAGACCTTGACACTCAGCCAGAGTTGCCTAGAGAGAACTGTGGAAGCTTTGAGAAAAGGAAGAGTGACCTTGGTAAAGATGCAATGGAGCCCCCAGGGCTTTTGTCTGCCGAATACCTTGAAACTCCGTCAGAGTTGCCTGGAGAGGATAACCATGGAAGCTTTGAGGAAAGCAAAAATAACCTTGTCGAAGATGCAATGGATGCCCCAGGTCACTTGTTTGCAGATGCAATCGAGCATGGTTTGGAGGAAGAAATCCGAATTCTTGGTCAAGAATATACCAACCTAGCATATGAGCAGAGGAAGCTTGAACGCAATGCCGAATCCGTCAACAGTGAATTATTTACTGAATGTCAGGAACTATTGCAAATGTTTGGCTTGCCATATATTATCGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAACTTGCAAAACTGGTGGATGGTGTTGTGACTGATGACTCTGATGTCTTTTTATTTGGGGCACGTAGTGTCTACAAGAATATATTTGATGATCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAGCTTGGATTGACCAGAGAAAAATTAATCTGCATGGCTTTGCTTCTGGGGAGTGATTATACTGAAGGTGTAAGTGGAATTGGAATTGTAAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTTCTGAAATTCCGGCAGTGGGTTGAGTCACCTGATCCTACCATCTTTGGAAGGTTTGAGACAAAAAGCGGATCCAGTACCCGAAAGAAAGGTTCAAAAGTTGAAGAAAATCTTCCTGGCAAAAATTGCAATATAGAAGAGACTATGACAGATCAAAACATTTCCCATGCTCAGCAACATGACTCATTAGATGACATCCAAGAAACTAAGCAGATTTTTATGAATAAACATAGAAATGTAAGCAAGAATTGGCATATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTACTCATGTCCACAAGTGGACAAGTCAACTGATCCATTTGCCTGGGGAAAGCCAGATCATCTTGTCCTTCGCAAATTGTGCTGGGAGAAGTTTGGCTGGACCAGTCAGAAAGCAGATGAGTTGCTTTTACCTGTTTTAAAGGAATACAACAAAAATGAGACTCAATTGCGGTTAGAAGCATTTTATACTTTCAATGAAAGATTTGCAAAAATTCGCAGCAAGAGAATTAAGAAAGCAGTGAAAGGAATCACTGGCGATCACCCTTTGGAGTCTACAGATGAGCATGCAGAGGACTTGTCTAAGAGTAGGAAGAATGAGACAGGAATCGCTGCTGAACTTGGGATTAGCAAATCAGAGACTTCTAAGGGAACAGGAGAAAGCCCTGCTGACATGAAGCATGTAAAACAGTCAAGTAAAAGGAAGAATTCTGGAGATACTGTTGCTAAGACACAGTCAAGGAAAAAGGGTAAATTGAATGCTCCTGCGTCGGCTTCTGGTCTGCTGGAGGTAGATGTGCAGACAGGAGCAGAGCAGGCTCATCCAAGTGATGATAATGGTTTGAGTTGGAATAGAAGTAATAAAGGCAGGGGAAAAGGTGTAAGAGTTCCAAGAGGAAGGAGGAAGAGAAGTCTTGGTACTGATTCACGTAAAACTACATCTAGTGATAGTGAAAGTGATGACCATGAGCCTGAAGTACATGGTATAAACTCAAGAGGCACTGAAGGGGTCCGAAGGTCTCTGCGATCTCGGAAGAGTGTCAACTATGCGATGGACAACATTGAAACTGAAGATACTGTTGCCTCATCTGATCAGAGCAATAAGACAGACGTGAATAGAGAGCAGACAGATGAAATATTTTCTGGGATGCATGGTGTTTGCGGCAATGATGACTCTGGTTTCAGCAGACACAAGGAAAGCACAATAAATCTTTCTCCTAAGAAAGATTTGCCTAGAAGCTATCTTGAATCTGGAGGGGTTTTCTGTACTGATGAAGAAAAAACTAGTCATGCAGGAGCGAGCAATTGTGATAGATCTCATGGTGCCGACTACCTTAAAGTGGGAGGTGGATTTTGCCTAGATGACAATGAGACCGGTAGCAAACATAATGAAATTCATGACGACGAGGACTACCTTAGAGTGGGAGGTGGATTTTGCCTAAATGAGGATGAGACCGGTAGCAAACATAATGAAATTCATGATGATTCGGCAACTATAGTGGATGATAGTGCAGAGCTCACTCGTGTTTGTTCTGGTTTTGTGGATGAGGCTGAATGTGATAAAAATATTGCTTATCAATCAAGTTCAGTCAATAAAACATCTGGAATTGAACTGCAAGATAGAGGGAACACTAAACTAAAGAGTGTGATGAATCATGAGTCTGTGAATACTAGAAGTAATTATGATCAGCTTGAGTCTGACACGAGGGTTTGGATATCAGAGAATGCCCAAGGCGATACTGAGAACGCCGCAGCAGCATTTAGTGCCATGCCTTTTCTTAGGAAGAAAAGGAGGAAGAGCTGA 5361 0.4242 MGVKGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPVLKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALKLKKLSDDVKNQRLKQNGEAKGQKKSVQVDLTGCDLGRTNEKEQDKTCEAEVDKNISKASVSTSCNQEDLDAMLAASIVAEEDELLAGKATCGVISLSEEEDDTDPEITLPALGAEVDLSVLAALPQLMQLDILSQLKGKKVEGPLKHSNNKKQFEVSEKDRGKGKGILLHEVDTVGCRSSSDDMVAKKYNQDKVDEMLAASIWAEENEKLVNNASASGGPFIFEEEDFINDEDEEMILPAMQGKVDPAVLASLPPSMQLDLLGQMREGLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKVAAGGVVGGVQTSRIASEANREYIFSRSFTGDRQQLTSTSLEKNKNTHQKTLGNHFSQGFVNNSDPANDSSPSSGLVCNEAGSPSDENIQTYLDERGQFRVSRLRAMGMRMTRDIQRNLDLMKEIEQERTVVNKAANNNAILSGEKNVASKASSNLLVDTSDGSNVDLVGDNSRNEQHPALAGDASLEISFMDDGYNKCLNDDDDDLFASLVAGNSAAFSSSDKNSLKEQVSDSSSDCDWEEGIVEGKSDVHVEIKSPVSKDNYNDESDVEWEDGVCDDANTTVCAAEAQKKASRGCLEEEADLQEAIRRSLEVMGDCKLNGAPSRHECSNADGDRSDYALNQDDNLVDSGVKSICGNFGAAKRDTGMGESTLHGEGNTEHTESNYKIIDDTMDGTVRSNKQVSQSPEGQSKSSVAFDSEKTVSFIKKPHSMEIGSHYEDLLTTADESRRNEIHMAAEQLLGTLNEDGKVFANGNKSPVADSLGASKEEKKNCSYEAEPFGNYSEKPEPVAPFVDSSSEGLTEDLDTQPELPRENCGSFEKRKSDLGKDAMEPPGLLSAEYLETPSELPGEDNHGSFEESKNNLVEDAMDAPGHLFADAIEHGLEEEIRILGQEYTNLAYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLICMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTIFGRFETKSGSSTRKKGSKVEENLPGKNCNIEETMTDQNISHAQQHDSLDDIQETKQIFMNKHRNVSKNWHIPSSFPSETVISAYSCPQVDKSTDPFAWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKNETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGDHPLESTDEHAEDLSKSRKNETGIAAELGISKSETSKGTGESPADMKHVKQSSKRKNSGDTVAKTQSRKKGKLNAPASASGLLEVDVQTGAEQAHPSDDNGLSWNRSNKGRGKGVRVPRGRRKRSLGTDSRKTTSSDSESDDHEPEVHGINSRGTEGVRRSLRSRKSVNYAMDNIETEDTVASSDQSNKTDVNREQTDEIFSGMHGVCGNDDSGFSRHKESTINLSPKKDLPRSYLESGGVFCTDEEKTSHAGASNCDRSHGADYLKVGGGFCLDDNETGSKHNEIHDDEDYLRVGGGFCLNEDETGSKHNEIHDDSATIVDDSAELTRVCSGFVDEAECDKNIAYQSSSVNKTSGIELQDRGNTKLKSVMNHESVNTRSNYDQLESDTRVWISENAQGDTENAAAAFSAMPFLRKKRRKS 1786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3289 1786 SUPERFAMILY PIN domain-like 2 1157 IPR029060 -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1532 1555 - -
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 173 193 IPR006084 -
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Alju02g3289 1786 FunFam DNA repair protein UVH3 1023 1141 - -
Alju02g3289 1786 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Alju02g3289 1786 Gene3D - 1 146 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 647 668 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 826 845 - -
Alju02g3289 1786 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1142 1350 IPR036279 -
Alju02g3289 1786 SMART xpgn3 1 98 IPR006085 GO:0004518
Alju02g3289 1786 SMART HhH_4 1144 1177 IPR008918 GO:0003677|GO:0003824
Alju02g3289 1786 MobiDBLite consensus disorder prediction 925 981 - -
Alju02g3289 1786 Gene3D - 1142 1198 - -
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Alju02g3289 1786 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Alju02g3289 1786 MobiDBLite consensus disorder prediction 954 977 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1365 1556 - -
Alju02g3289 1786 Pfam Ubiquitin binding region 363 387 IPR025527 -
Alju02g3289 1786 Pfam Ubiquitin binding region 229 253 IPR025527 -
Alju02g3289 1786 CDD PIN_XPG_RAD2 2 92 - -
Alju02g3289 1786 CDD H3TH_XPG 1145 1288 - -
Alju02g3289 1786 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 274 - -
Alju02g3289 1786 FunFam DNA repair protein UVH3 1 146 - -
Alju02g3289 1786 ProSitePatterns XPG protein signature 2. 1076 1090 IPR019974 GO:0016788
Alju02g3289 1786 Gene3D - 1025 1141 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1458 1472 - -
Alju02g3289 1786 FunFam DNA repair protein UVH3 1142 1199 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1365 1385 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1406 1432 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 647 661 - -
Alju02g3289 1786 MobiDBLite consensus disorder prediction 478 513 - -
Alju02g3289 1786 Pfam XPG I-region 1076 1157 IPR006086 GO:0004518
Alju02g3289 1786 MobiDBLite consensus disorder prediction 1487 1515 - -
Alju02g3289 1786 CDD PIN_XPG_RAD2 1059 1143 - -
Alju02g3289 1786 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Alju02g3289 1786 SMART xpgineu 1073 1142 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3289 Alju-ChrAlju02 50603233 50614266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3289 1067 1174 Core DNA Replication Machinery Family AT5G26680 36.036 5.04e-12 68.2