LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g3287	ATGGCTTCTCACTTCTGGGTTCGCTGCCTCGTCTTCAAAGTCGCCGTCTTTATCATCTTCTCCGGCCTAACGCCGTCGGTTTCTCTGGCTCAGTCCGCCGATTCCTGCAACGGAATATTCTTGTCCTACGTCTACAACAGGGGAAGACGGCTGCCTCCCAACGTCTCCGATTCCGGCAAGCAGCCCCACCGGTTCGAGTCTACTCTCACTGTGGTCAACAATGGACTCGACGAGCTTCAGTCCTGGAAGGTTTTTGTGGGGTTTCAGCACGACGAGTATTTGGTCTCTGCATCAAACGCAGTTCTTGCCGGTGGCGCTAACTTACCCGCCGACGTCGGAAACGGCACTATTCTTGCAGGGTTCCCCGTGACGGACCTCAAGACGGCGGCGGAGACAGCCGGAGACTTGACGCAGATGCAGGTTCAGATCAATTTAGTGGGGACACAGTACGGTGTTGAGCCGCCGGCGGTGCCCCTGCCGTCGAACATCACTCTAGCCAATGACGGGTTTGTTTGTCCCAAGTCAACTGGCCAAGGGAATGAGACTCATGTTTGTTGCACAAGAGACCCCAATTTCAAGACAAGCATAACCACAGGCCAAGAGTTTCTGCCTCGCCAGAGTGGTGATCTTACAATTATGTACGATGTGACCAGTACTTATGATTCCAATTACTGGGCTGAGGTCACAATCTCAAATCATAATCCTCTTGGACGTCTTGATAACTGGAGATTAAGCTGGGACTGGATGAGGCAAGAATTTATCTTTGCAATGAAAGGTGCTTATCCTTCTGTGATTGACCCTTCTGAGTGTATCTTCGGAGGACAAGGAGGACACTACCAAGGCTTTGACTTTTCCAAGGTTTTGAGTTGTGAAAAAAGTCCAACCATAATTGATCTGCCTCCTACAATGTTCAATGATTCAAACCTCGGAAAAATCCCTTTTTGTTGCAGGAATGGAACTATCTTGCCTCCATCAATGGACCCAAGTAAGTCATCTTCAAGGTTCCAAATGCAAGTCTACAAAATGCCACCAGATCTTAACCTCTCCGTGCTCACTCCACCACAGAACTGGAAGATAAGTGGTAAACTCAATCCTGGCTACAAATGTGGCCCTCCACTTCGGGTTAGCCCGAGTGAAAACCCGGATCCCTCAGGCTTACCTTCGAATATATCTGTGATTGCTAGCTGGCAGGTTGTGTGCAATATAACAAGGGACAATGGGGCTGCAAGAAAATGCTGTGTCTCATTTTCTGGTTATTACAATGAATCTGTCATTCCTTGCAAGACATGTGCATGTGGATGCACAGACAACACAGGAAGAACATGTAGTACAAACTCGCCGGCTATGTTGCTTCCGGCTGAGGCGCTTCTTGTTCCATTCGAGAACCGTAGTGCCATGGCTGTTTCTTGGGCTGACATGAAGCATTTCACAGTGCCAAACCCAATGCCTTGTGGTGATAACTGTGGAGTGACCATAAATTGGCACGTGCTCACGGATTATAACAAAGGTTGGAGTGCGAGGATCACGCTGTTTAACTGGGATGAGACTGCTTATGCAGATTGGTTTGTTGCAGTAGAAATGAACAAGGCAGGTCCAGGTTTTGAGAAGATGTACTCTTTCAATGCAAGTGACTTGGAGGGAGTGATGAGTAACACTATAATGATGCAGGGTGCTTCAGGAAATAACTATCTTCTTGCAAAAACTGATGGGAATGACCCTAAGAAAGATCCTAGGGTTCCTGGGAAACAACAGTCAGTGATCTCATTTACAAAGAAAAATACTCCTGGAATTAATGTGGTTGGTGGTGATGGGTTTCCCACTAAAGTGTTCTTCAATGGAGAAGAATGCTCTCTTCCTTCTGTGTTTCCAAGCAGTGGTTTCAAGAAAGAGGTTTCTTTGTTCTTAACACTATCAGTACCACTACTGTTCATCATCTTGATGAAGTTTTAA	1950	0.4708	MASHFWVRCLVFKVAVFIIFSGLTPSVSLAQSADSCNGIFLSYVYNRGRRLPPNVSDSGKQPHRFESTLTVVNNGLDELQSWKVFVGFQHDEYLVSASNAVLAGGANLPADVGNGTILAGFPVTDLKTAAETAGDLTQMQVQINLVGTQYGVEPPAVPLPSNITLANDGFVCPKSTGQGNETHVCCTRDPNFKTSITTGQEFLPRQSGDLTIMYDVTSTYDSNYWAEVTISNHNPLGRLDNWRLSWDWMRQEFIFAMKGAYPSVIDPSECIFGGQGGHYQGFDFSKVLSCEKSPTIIDLPPTMFNDSNLGKIPFCCRNGTILPPSMDPSKSSSRFQMQVYKMPPDLNLSVLTPPQNWKISGKLNPGYKCGPPLRVSPSENPDPSGLPSNISVIASWQVVCNITRDNGAARKCCVSFSGYYNESVIPCKTCACGCTDNTGRTCSTNSPAMLLPAEALLVPFENRSAMAVSWADMKHFTVPNPMPCGDNCGVTINWHVLTDYNKGWSARITLFNWDETAYADWFVAVEMNKAGPGFEKMYSFNASDLEGVMSNTIMMQGASGNNYLLAKTDGNDPKKDPRVPGKQQSVISFTKKNTPGINVVGGDGFPTKVFFNGEECSLPSVFPSSGFKKEVSLFLTLSVPLLFIILMKF	649

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g3287	649	PANTHER	COBRA-LIKE PROTEIN 7	30	641	-	-
	Alju02g3287	649	SUPERFAMILY	Carbohydrate-binding domain	206	248	IPR008965	GO:0030246
	Alju02g3287	649	Pfam	COBRA-like protein	224	403	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g3287	Alju-ChrAlju02	50574723	50577506	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g3287	36	634	COBRA Gene Family	AT4G16120	64.628	0.0	841