Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3284 ATGGTGGTCGATCTGAGTGGAAAAGGATCGGAGGCCGAGGACGCTAATAACAGAAACCCTAACGGAGATTCATCGGAAGATAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGATTGTGGCACATCAAAAACCCCTCTCTGGAGAGGCGGTCCCGCCGGTCCCAAGTCTCTGTGCAACGCGTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTTTGGGATTGAACAAGGGAAGTACAGAAGAGAGAAAGGGCAAGAGAAGCAACAACAATAGTAAGATTGGGGAAAGTTTGAAGCAGAGATTAATGGCTCTGGGAAGAGAGGTTCTGATGCAGAGATCAACGGTGGAGAGGCAGAGGAAGAAGCTAGGCGAGGAAGAACAAGCCGCTGTGTTGCTGATGGCTCTCTCATATGGCTCTGTTTATGCCTAA 438 0.5023 MVVDLSGKGSEAEDANNRNPNGDSSEDSPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGLNKGSTEERKGKRSNNNSKIGESLKQRLMALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3284 145 Pfam GATA zinc finger 38 72 IPR000679 GO:0006355|GO:0043565
Alju02g3284 145 CDD ZnF_GATA 37 89 IPR000679 GO:0006355|GO:0043565
Alju02g3284 145 MobiDBLite consensus disorder prediction 1 54 - -
Alju02g3284 145 MobiDBLite consensus disorder prediction 12 41 - -
Alju02g3284 145 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 30 72 - -
Alju02g3284 145 Gene3D - 32 97 IPR013088 GO:0006355|GO:0008270
Alju02g3284 145 ProSiteProfiles GATA-type zinc finger domain profile. 32 68 IPR000679 GO:0006355|GO:0043565
Alju02g3284 145 PANTHER OS01G0976800 PROTEIN 7 145 - -
Alju02g3284 145 MobiDBLite consensus disorder prediction 75 99 - -
Alju02g3284 145 MobiDBLite consensus disorder prediction 76 92 - -
Alju02g3284 145 ProSitePatterns GATA-type zinc finger domain. 38 63 IPR000679 GO:0006355|GO:0043565
Alju02g3284 145 SMART GATA_3 32 96 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3284 Alju-ChrAlju02 50530079 50530729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3284 30 145 C2C2-Gata Transcription Factor Family AT3G06740 72.034 1.76e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju02g3284 GATA 1.4e-16 CL0167