Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3283 ATGGTCGATCTGAGTGGAAAGGGATCGGAGGCAGAGGACACCAATAACAGAAACCCTAACGGAGATTCATCGGAAGAAAGTCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACATCCAAAACCCCTCTCTGGAGGGGCGGTCCGGCCGGTCCCAAGTCTCTGTGCAACGCGTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTCTAGGCATGAGCAAGGGAAGTACAGAAGAGAAAAAGGGCAAAAGAAGCAGCAACAATGCTAAGATTGGGGATAGTTTGAAGCAGAGATTAATGTCTCTGGGAAGAGAGGTTTTGATGCAGAGATCAACGGTGGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCCGCCGTGTTGTTGATGGCTCTCTCATATGGCTCTGTTTATGCTTAA 435 0.5034 MVDLSGKGSEAEDTNNRNPNGDSSEESPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMSKGSTEEKKGKRSSNNAKIGDSLKQRLMSLGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3283 144 CDD ZnF_GATA 36 71 IPR000679 GO:0006355|GO:0043565
Alju02g3283 144 MobiDBLite consensus disorder prediction 75 91 - -
Alju02g3283 144 ProSitePatterns GATA-type zinc finger domain. 37 62 IPR000679 GO:0006355|GO:0043565
Alju02g3283 144 SMART GATA_3 31 95 IPR000679 GO:0006355|GO:0043565
Alju02g3283 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 71 - -
Alju02g3283 144 ProSiteProfiles GATA-type zinc finger domain profile. 31 67 IPR000679 GO:0006355|GO:0043565
Alju02g3283 144 Gene3D - 31 95 IPR013088 GO:0006355|GO:0008270
Alju02g3283 144 MobiDBLite consensus disorder prediction 9 40 - -
Alju02g3283 144 MobiDBLite consensus disorder prediction 1 98 - -
Alju02g3283 144 Pfam GATA zinc finger 37 71 IPR000679 GO:0006355|GO:0043565
Alju02g3283 144 PANTHER OS01G0976800 PROTEIN 7 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3283 Alju-ChrAlju02 50523783 50524432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3283 1 144 C2C2-Gata Transcription Factor Family AT3G06740 60.784 8.45e-54 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju02g3283 GATA 1.4e-16 CL0167