Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3282 ATGAGTGCCTCAGAAAACCCTAACTCTAATAAGTGCGAGGCGAGAAAATCTTCATCATCATCTTCTTCTTCAGCTAATCTGAAGCTATTTGGTTTCCCATTAGGTGCAAGTGCTCGTGATGCTTTCATTTCCTCATCAAACCATAAGAGATCATTCAAATGCCATTTCTGTCAGAAAGAATTCTCTAATTCTCAAGCTCTTGGAGGCCACCAAAATGCTCATAAAAGAGAACGTCGTCAAGCTACCTTAGCTCATTTCGACAACCTTAGCGTTCATCTTCTTCCTCATCGGCAACGCCTCGAGATCACTTCATCATCTTCAGCACCATCAGGACCGTCCACGACGACTAACCTTGTTCATCATCATCATCATCAACCTTTTTGGTCCGAACCGGAGCTTTGGAATGGAATTCGATCCGACGACAGAGAGGCACGTGTTGATGCTGAGAAAGAGCTCTCGAGTGATGAAGGATCAGTACGAAATAGTGATGATGGTGTTGATCTTAACTTGAGTTTATAG 519 0.4335 MSASENPNSNKCEARKSSSSSSSSANLKLFGFPLGASARDAFISSSNHKRSFKCHFCQKEFSNSQALGGHQNAHKRERRQATLAHFDNLSVHLLPHRQRLEITSSSSAPSGPSTTTNLVHHHHHQPFWSEPELWNGIRSDDREARVDAEKELSSDEGSVRNSDDGVDLNLSL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3282 172 PANTHER ZINC FINGER PROTEIN 5 15 172 IPR044299 GO:0010090
Alju02g3282 172 MobiDBLite consensus disorder prediction 102 125 - -
Alju02g3282 172 MobiDBLite consensus disorder prediction 139 172 - -
Alju02g3282 172 MobiDBLite consensus disorder prediction 139 162 - -
Alju02g3282 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Alju02g3282 172 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Alju02g3282 172 MobiDBLite consensus disorder prediction 102 122 - -
Alju02g3282 172 MobiDBLite consensus disorder prediction 1 25 - -
Alju02g3282 172 SUPERFAMILY beta-beta-alpha zinc fingers 49 79 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3282 Alju-ChrAlju02 50490275 50490793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3282 27 105 C2H2 Transcription Factor Family AT5G06650 41.111 3.33e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju02g3282 None None None