Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3281 ATGGTAAGAGCACCGTGCTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACAGCTGAAGAAGATCAGATATTGACACAGTACATCCAACAACATGGTGAAGGATCCTGGAGGAACTTGCCCAAGAATGCTGGATTGTTGAGGTGTGGGAAGAGTTGCAGATTGAGATGGATAAACTACTTGAGGGCAGATGTGAAGAGAGGAAACATAACTCCTGAGGAAGAAGAAATTATAGTCAAGTTGCATGCTGCTCTTGGCAACAGGTGGTCTGTGATAGCAGGACATTTACCAGGACGGACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTAAGGAGAAAAATCTACTGCTTCATCAAAACCCTAAACGAATCCCTTCCTTCTATAAACGACATTGCTACTTCCACCAAACGACGAGGTGGTCAGGTCAGGCCCACTCAACCCACCACCAAGCCCAACAACCCGACTCCTGCGGCCCAAAATTTCCACACGCCCAATAACGTAGGCAAGGTGTTTGAGAAAATGTCCAAACCAATCCCAAACCCACAAACTTGTGCTAATAATGCAGGACCTAATCAACATGTTGCCATAACGGCTTCTTTATGTTCAAGTGATGATAATCTTGAAGAAACCATGGGACCATATCAGTGGCTAGACGATGAGATAAAGAAACTTAGTTACATGTTGGAAAATGGGGTGTTTATGAATGCAAGTGAGGATTATGTGGAACCAGAAAATGAATTAGTAATGAGCAGACATCATGACATGGTTGGGGGAGATTTGTATGAACTTGTGGGAAAGCACATAATGGGAGCAAGTGACGAGGATGTTATGAGCAGAAATAGTAACGTTAATTCATCGGAGATTTCGGTCTATGATTATCAGTGGCTTGATTGGGATTACCACCAACAAGATCTTTGTGAAGAAGAGAACCTGAATGTGAACTGTTTGTGGGGTGATGGAAATGGTGGAGAATTTGGGGGAAGTCTGTGTTCATATTAA 1005 0.4279 MVRAPCCEKVGLKKGRWTAEEDQILTQYIQQHGEGSWRNLPKNAGLLRCGKSCRLRWINYLRADVKRGNITPEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLNESLPSINDIATSTKRRGGQVRPTQPTTKPNNPTPAAQNFHTPNNVGKVFEKMSKPIPNPQTCANNAGPNQHVAITASLCSSDDNLEETMGPYQWLDDEIKKLSYMLENGVFMNASEDYVEPENELVMSRHHDMVGGDLYELVGKHIMGASDEDVMSRNSNVNSSEISVYDYQWLDWDYHQQDLCEEENLNVNCLWGDGNGGEFGGSLCSY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3281 334 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju02g3281 334 Gene3D - 71 116 - -
Alju02g3281 334 CDD SANT 16 61 IPR001005 -
Alju02g3281 334 SMART sant 66 114 IPR001005 -
Alju02g3281 334 SMART sant 13 63 IPR001005 -
Alju02g3281 334 MobiDBLite consensus disorder prediction 135 165 - -
Alju02g3281 334 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju02g3281 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g3281 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g3281 334 FunFam Myb transcription factor 11 67 - -
Alju02g3281 334 Gene3D - 13 66 - -
Alju02g3281 334 FunFam Myb transcription factor 71 116 - -
Alju02g3281 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju02g3281 334 CDD SANT 71 112 IPR001005 -
Alju02g3281 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g3281 334 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 186 - -
Alju02g3281 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3281 Alju-ChrAlju02 50474057 50477973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3281 1 313 MYB Transcription Factor Family AT5G49330 41.547 6.96e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g3281 Myb_DNA-binding 7.7e-14 CL0123