Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3272 ATGATTTCAGGTCGTTGTGCAGCTTGTAAGAGTCAAAGAAGAAAGTGTCCTCCAGATTGCATTTTCTCTCCCTATTTTCCTCCCAACGATCCTCAAAGATTTGCTTGCGTTCACAGAATATATGGTAGCAGCAATGTCGGAAAAATGCTTCAGCAAATACCAGTGCAAATGAGAGCACAAGCAGTGGATACATTATATATGGAAGCAAGATGGAGGATAGAAGATCCAGTGTATGGTTGTGTTAAGCTTATATCTCAGTTGCATCAGAACTTAGATGATACAGAAAGTGAATTAGCCAAAGTTAAAGCTCTTATTGCCTTCTACAAGCTCCAAATCTCACAAGTTAATGAACTTCATCAACCCAACTTGGATGCTTCACAAAGCAATGTTGAGCAGTTTCAGTTCAATTATTCTACTGAGAATCAATATCCTCGGTTTATTACTTAG 447 0.3848 MISGRCAACKSQRRKCPPDCIFSPYFPPNDPQRFACVHRIYGSSNVGKMLQQIPVQMRAQAVDTLYMEARWRIEDPVYGCVKLISQLHQNLDDTESELAKVKALIAFYKLQISQVNELHQPNLDASQSNVEQFQFNYSTENQYPRFIT 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3272 148 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 128 - -
Alju02g3272 148 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Alju02g3272 148 Coils Coil 84 111 - -
Alju02g3272 148 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3272 Alju-ChrAlju02 50359444 50360195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3272 1 116 AS2 family AT3G26620 59.483 3.07e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju02g3272 LOB 5.4e-37 No_clan