Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3252 ATGAGATCAAGGTGCCCTTCAAGAAGCCATTTGGCCAAAGGCATAAAATTTTTTATAACTTATGTTTGGCAACCTGGCGACAATGTTTCTGTCGTTAGTACCAAGTTTAATGCATCTGAAATGGACATAATGACAGAAAACAAGTACCGGAACTTCACCTCTACAGCCAACCTTCCAATTATGATCCCGGTGTCGCAGCTTCCAGACGTTTCTCGATTTTATTCATCACCAAAGAGAAAGGGAAACAATAATCGCCTTTTGGTTATCGTAGGTATTATATTGGGATGCACTCTTCTGACTGTTCTTATAACTATGTCACTGGTCTATGTTTATTGTCTGAGAAAGAAAAAGATTCGTTTGAAAAAGAGTGCTTCATATTTGGGGACAGCAGATAAGCTACTTTCTGGGGTCTCGGGTTATGTAAGCAAGCCAACCATGTATGAGTTTAGTATAATTATGGAAGCTACCATGAATCTTAATCAACAGTGCAGGATTGGGGGATCAGTCTATAAGGCCAAAATCGACGGGCAGGTCTTAGCAGTGAAAAAAGTGAAGGAAGACGTCATGGAGGAGTTAAAGATTCTGCAGAAGGTAAATCACGCGAATCTGGTGAAATTAACGGGCTTCTCATTAGACGACAATGCTGGAAATTGCTTCTTGGTTTATGAATATGCTGAAAATGGATCTCTTGATAATTGGCTGTACTCCATGTCTGCTTCAGACGCTTCTTCTGGTTCTGTGTCATTTCTCACATGGAGCCAAAGGATATGCATTGCACTAGACGTGGCCATGGGTTTGCAATACCTGCATGAACTCACTCAACCAAGAATAGTCCACAGGGACATCAGAACCAGTAACATACTTCTCGACTCGAGTTTCAAGGCCAAGATAGCGAACTTCTCGATGGCAAGAGCTTCTACAAACCCAATGATGCTAAAATCAGATGTTTTTGCCTTTGGGGTTGTTCTGCTGGATTTGCTCACAGGGAAGAAAAGCATGGCGACGAATGAAAAAGGCGAGGTAGTGATGGTGTGGAAGGATATCAGAGGAATCTGTGATGGAGAGGATGAGAAGAAGAAAAAGGAGAGACTGAGAAAATGGATAGATCCTAGGCTGGGAAACTTGTATGCCATTGATGATGCTCTAAGCTTGGCCTCCTTGGCAGTGACTTGCACTGCAGATAAGCCTTTGTCCAGACCAACTATGGAAGAAGTTGTTCTTAGCCTGTCGTTTCTGAGTCAATCATGTCCTGGTGTGATGGTAGAACGATGGACTTGTCCAGGTGGGTTAGATGCTGAAGTTCCTCAAATGATAAGTCCCATCACAGCTCGTTGA 1335 0.4277 MRSRCPSRSHLAKGIKFFITYVWQPGDNVSVVSTKFNASEMDIMTENKYRNFTSTANLPIMIPVSQLPDVSRFYSSPKRKGNNNRLLVIVGIILGCTLLTVLITMSLVYVYCLRKKKIRLKKSASYLGTADKLLSGVSGYVSKPTMYEFSIIMEATMNLNQQCRIGGSVYKAKIDGQVLAVKKVKEDVMEELKILQKVNHANLVKLTGFSLDDNAGNCFLVYEYAENGSLDNWLYSMSASDASSGSVSFLTWSQRICIALDVAMGLQYLHELTQPRIVHRDIRTSNILLDSSFKAKIANFSMARASTNPMMLKSDVFAFGVVLLDLLTGKKSMATNEKGEVVMVWKDIRGICDGEDEKKKKERLRKWIDPRLGNLYAIDDALSLASLAVTCTADKPLSRPTMEEVVLSLSFLSQSCPGVMVERWTCPGGLDAEVPQMISPITAR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3252 444 Pfam Protein tyrosine and serine/threonine kinase 182 306 IPR001245 GO:0004672|GO:0006468
Alju02g3252 444 SMART tyrkin_6 159 409 IPR020635 GO:0004713|GO:0006468
Alju02g3252 444 SUPERFAMILY Protein kinase-like (PK-like) 165 412 IPR011009 -
Alju02g3252 444 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 416 - -
Alju02g3252 444 Gene3D Phosphorylase Kinase; domain 1 135 224 - -
Alju02g3252 444 Gene3D Transferase(Phosphotransferase) domain 1 225 308 - -
Alju02g3252 444 ProSitePatterns Tyrosine protein kinases specific active-site signature. 277 289 IPR008266 GO:0004672|GO:0006468
Alju02g3252 444 Gene3D Transferase(Phosphotransferase) domain 1 309 416 - -
Alju02g3252 444 ProSiteProfiles Protein kinase domain profile. 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3252 Alju-ChrAlju02 50084464 50085938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3252 11 415 Receptor kinase-like Gene Family AT3G21630 32.009 1.59e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju02g3252 PK_Tyr_Ser-Thr 2.2e-23 CL0016