Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3245 ATGCTTACGTGCATAGCTCGTCCGAAGAAACTTGGACATGAGTCAATGGATCAGCCCGATGAATCCGATTCTAGCAACTCAAGCGCGGCCAAGAGTCAAGCTACCAAATCCCTCACTTCTCAGCTCAAGGATATGGCGTTGAAGGCATCCGGAGCTTACAAGCATTGCGCCCCCTGCACCGGACCACAGACACAGAATCGACTCAGGGCCAGTACTGAGTCAGAGTCAGAATCGGATCGGTTCCGATGGCCCTACCGGCGAACGGCGAGCTCAAACTCGACATCAACAAGGACATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGAGAGGGGACGCCGAACTCTGCCAGCGGACGGCGGGTTGAGCCGGTGGTTCTGTTCATCGAAGAGAACGAACCTAAGGAGTGGGTCGCGCAGGTGGAAACCGGCGTATTAATCACCTTTGTATCACTTCCGAGCGGAGGAAATGATTTGAAGCGAATCCGGTTCAGTCGAGAAATGTATAACAAATGGCAAGCGCAAAAATGGTGGGCAGAGAACTATGAAAGGGTCATGGAACTTTACAACGTTCAGAAGCTTAATCGCCAAGCCTTCCCTCTTCCAACACCACCAAGATCTGAAGATGAGCTCTCAAAGCTTGAGTCAGTGGAAGATTTCCCTGTGACACCTCCTCTAACCAAAGAACGATTACCTCGTAATCTACATCGCCCAACGGGGATGGGAACGGGATACTCATCATCGGATTCTTTTGATCACCGTTCAATGCAATCCCGGCATCATCATGACTCGGCTGGCCTCAACTCAACCCCTAAAGTCTCCACCATAAGCACGGCCAAGACAGAAGCATCATCCATGGACGCCTCTATCAGAAGCAGCTCATCCAGGGAGGCTGATCCTTCAATCAGCAATGCCAGTGATCAGGACACTGAATGGGTCGAACAGGATGAACCTGGGGTTTATCTTACAATCAGAGCATTGCCAGGTGGCAAAAGAGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTATGGTGGGAAGAGAATCGAGGCAGGGTACATGAACAATACTTGTGA 1107 0.5113 MLTCIARPKKLGHESMDQPDESDSSNSSAAKSQATKSLTSQLKDMALKASGAYKHCAPCTGPQTQNRLRASTESESESDRFRWPYRRTASSNSTSTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFIEENEPKEWVAQVETGVLITFVSLPSGGNDLKRIRFSREMYNKWQAQKWWAENYERVMELYNVQKLNRQAFPLPTPPRSEDELSKLESVEDFPVTPPLTKERLPRNLHRPTGMGTGYSSSDSFDHRSMQSRHHHDSAGLNSTPKVSTISTAKTEASSMDASIRSSSSREADPSISNASDQDTEWVEQDEPGVYLTIRALPGGKRELRRVRFSREKFGEVHARLWWEENRGRVHEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3245 368 MobiDBLite consensus disorder prediction 1 81 - -
Alju02g3245 368 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Alju02g3245 368 MobiDBLite consensus disorder prediction 21 44 - -
Alju02g3245 368 Pfam Transcription factor BRX N-terminal domain 23 59 IPR027988 -
Alju02g3245 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Alju02g3245 368 Pfam Transcription factor regulating root and shoot growth via Pin3 313 367 IPR013591 -
Alju02g3245 368 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Alju02g3245 368 MobiDBLite consensus disorder prediction 265 312 - -
Alju02g3245 368 MobiDBLite consensus disorder prediction 201 316 - -
Alju02g3245 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3245 Alju-ChrAlju02 49954674 49961159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3245 1 368 Major Intrinsic Protein MIP AT1G31880 41.451 2.31e-89 271