Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3191 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAATGCCGAACTCCCTCCTCCTCCGCCGCCGCCGCCACTTCAACAACCTCCGCAACATCAAATGATCCTCGGCGACAGCAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTGCAAGACGAGACGCGAAATCTTATAGGTTTTCGCCGTGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGCAACAGATATCGGTGAAGATGAGAGATAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGTTGAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCATATTACAAAGACATTGAGGAGATTTTGAAAGAGAGGAGCAAGAGTATATGCTACAAGAGCCCTACTCCTCCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACGGGCATTTCTTTTGGGCCTGTTGAAGGTCCAGCCACTGGCAGGTCAACAACGCTCAATCTTGAGAATCGCTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGAGTTCCTCCTTGGAGTTGGAGAGAAACTCCTATAAGCGGTGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCAGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAGTAAGGAGCCTTGACCGAGATATGCCTGTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAATTTGCCTCTATGATGACTCTGACCAAATTCATGTTCATACTGAAGAGAAGATTTTCTACACTGAGGAAGATCACCGTGATTTCCTGGCCCGGCGGGGCTGGACATGTCTAAGGGAACTTGATGGGTATAGAAACATTGATAACTTGGATGATCTTCAACCTGGTGCCATGTACCGTGGTGTAAGTTGA 1155 0.4597 MYLSEKPRPIDFYKEEATPDMMIEVASNAELPPPPPPPPLQQPPQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIGFRREMDGLFNTSKSNKHLWQQISVKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSICYKSPTPPKVESYMQFSDKGMEDTGISFGPVEGPATGRSTTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISGGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIVRSLDRDMPVGNYTLHLDEGMAIKICLYDDSDQIHVHTEEKIFYTEEDHRDFLARRGWTCLRELDGYRNIDNLDDLQPGAMYRGVS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3191 384 PANTHER FI21293P1 45 359 - -
Alju02g3191 384 MobiDBLite consensus disorder prediction 29 44 - -
Alju02g3191 384 CDD GT1 70 135 - -
Alju02g3191 384 ProSiteProfiles Myb-like domain profile. 64 128 IPR001005 -
Alju02g3191 384 MobiDBLite consensus disorder prediction 1 55 - -
Alju02g3191 384 Gene3D - 72 134 - -
Alju02g3191 384 SMART sant 68 130 IPR001005 -
Alju02g3191 384 FunFam trihelix transcription factor GT-1 72 134 - -
Alju02g3191 384 Pfam Myb/SANT-like DNA-binding domain 71 155 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3191 Alju-ChrAlju02 49275858 49280859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3191 20 383 Trihelix Transcription Factor Family AT3G25990 66.667 2.11e-174 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g3191 Myb_DNA-bind_4 6.9e-19 CL0123