Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3176 ATGTGGCAGAATCATCCTTACAAATCTTCTTCTTCTTCTTGTTTAAGAGATTCTATTGTGGCTCTTGAAGCTGATATCCAACATGCCAATACCCTGGTAGCTTCACTAGCAGGAGGGTATGGAGGGGACCATATTCAGATGAAACTATCATACAGTCCTTTGGCTCCTTTATTCCTTTATTTGATCCAATGGCTGGATTTTACTTGTACCCACTCCCTACCCACTTCTCTTGGCTTATTCCACATCCTTATTTTCAAGGTGTACGGTGATGGAATAACATCCTTATCCTCCAAAGAAAGAAAAGCATCTCTGAAGGATTTCTACGGTGTAATATACCCATCACTGAGGCAGCTTGAAGGAGAGTTTAAAGCAGATGAAGGTAAAGATAATAGAAATAATTGCACACAAATTGTGAATAGAAAAAGCTTCAAGAAAGGGTTTGAGAATAAAGAACTAGAGTTCATGAGAGACGATGAATGTGGAATCTGCATGGAGTTGAGCATGATTATGGTCCTCCCTGATTGTGGCCACTCCTTGTGCATAACCTGCTTCCATGACTGGAATGTGAGATCAGAGTCATGCCCATTTTGCAGGGGAAGCCTGAAGAGAGTGAGTCCAAGAGATCTATGGGTTGTGATAGACAACAGTGAAGTGGTTGATAGACTCACACTCGCAAAAGACAACCTCACACGTCTCTATCTTTACATTGACTCACTCCCTCTTCTTGCTCACCACCACGATGCTCATGTCTTCCTCTCCAACTATATGCTTTAA 774 0.4186 MWQNHPYKSSSSSCLRDSIVALEADIQHANTLVASLAGGYGGDHIQMKLSYSPLAPLFLYLIQWLDFTCTHSLPTSLGLFHILIFKVYGDGITSLSSKERKASLKDFYGVIYPSLRQLEGEFKADEGKDNRNNCTQIVNRKSFKKGFENKELEFMRDDECGICMELSMIMVLPDCGHSLCITCFHDWNVRSESCPFCRGSLKRVSPRDLWVVIDNSEVVDRLTLAKDNLTRLYLYIDSLPLLAHHHDAHVFLSNYML 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3176 257 Pfam Zinc finger, C3HC4 type (RING finger) 157 203 - -
Alju02g3176 257 SMART ring_2 160 197 IPR001841 -
Alju02g3176 257 PANTHER RING FINGER PROTEIN 41, 151 14 253 - -
Alju02g3176 257 SUPERFAMILY RING/U-box 151 203 - -
Alju02g3176 257 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
Alju02g3176 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 222 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3176 Alju-ChrAlju02 49116379 49121925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3176 159 206 C3H Transcription Factor Family AT2G42030 42.308 5.36e-06 45.1