Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3165 ATGCTATTCGCGCCGAACGCAACCTCTTCTCCTTTCTCTTACCGGCCGACCTTAACGACCAGCCCTCTCCTTCATCGGTCTTACCAACAAACCAATCTCTTCCATTCCAGGAACTTCCCTGGCCGTTCGCTTTCCGTCACCAGGTTCGCCTTCAAGCCTGGTTTCCTACCGGAACCTCATGGCGCTGAGGAGCTTGTTAAGGACTTGCTTAATCGAGCTGATGCTTTTCTGTACACTGTTGCCGATGCCGCTGTTTCATCTTCCGATACGGTGGCTACCACCACTAAACAGAGCACCGACTGGCTTTCTGGTGTTACCGGTTACATGGAGAGCGTTCTCAAGGTACTGAAGGATGGGCTTTCTGCCTTGCACGTACCGTATGCTTATGGCTTTGCCATTATTCTCCTTACAATTATCGTTAAGGCTGCTACATTTCCACTGACAAAGAAACAGGTAGAATCTTCCTTGGCTATGCGGTCTTTGCAGCCTCAAATAAAGGCTATTCAGCAACGCCATGCTGGTGATCAGGAAAGGATCCAACTTGAGACTGCTCGGTTATATAAATTGGCTGGCATTAATCCTCTAGCAGGATGCCTGCCTACGCTTGCAACAATACCTGTATGGATTGGGCTGTATAGAGCACTGTCAAATGTGGCTGATGAGGGACTTCTTACGGAGGGTTTCTTCTGGATACCTTCCCTCGCTGGCCCAACTACAATTGCTGCCCGTCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCCTACCTTGTGTTGCCTGTATTGCTGGTTGTTACTCAGTACATTTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAGAGTTCACAAGCCCTAACTAAGGTCCTTCCTTTAATGATTGGTTACTTTGCTCTGTCAGTTCCTTCTGGTTTAAGTCTTTACTGGTTCACTAATAATATATTGAGCACAGCACAACAAGTATGGCTTCAAAAACTTGGAGGGGCCAAAAACCTGGTGATGCAAGTACGTGATGATACAGTGAATGAGAATTTAATGCAAATTCAGAAGTCAGTCTCTGAGCTAAATCCCCCTAAAAGAGAGGCCAGTCCAGGTGTGAAGTCGACATCAGAGGGACCAAAACCAGGTGACAGATTTAAGCAACTAAAGGAGCAAGAGGTAAAGAGAAGACAACAGAGAGAAGAAGAAACAAGGAAAACTGAGGAGGCAGCGGCTATAGCAACTGAAGTACATGAGGCGGGGGACAAAACAGCCCAGGTGGGAAATGAGGATGGAGATGGAGTTGCTGTAAAATCTGATGCTGTGACCACGGATAATGATCCTTCTACTTCTGGTATTGTTGTGAATGGCAATCCATCTAGTGGGGACTTTGGGAGACATCAAAAAGCCACATCTACATTGCATACAGAAAATAAAGATTCTGCTGATTTCCAGTTCAATGAAAGGAATGAGAAAAGTCTAGAAAAGGAAACAGAAGTATACCCACCTGCTGCCACAGACAACAAGGCTCCTGCTGAAGACCCAGATCAAGTGAGGAAGGATTGA 1599 0.4622 MLFAPNATSSPFSYRPTLTTSPLLHRSYQQTNLFHSRNFPGRSLSVTRFAFKPGFLPEPHGAEELVKDLLNRADAFLYTVADAAVSSSDTVATTTKQSTDWLSGVTGYMESVLKVLKDGLSALHVPYAYGFAIILLTIIVKAATFPLTKKQVESSLAMRSLQPQIKAIQQRHAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVTQYISVQIMQSSQPNDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKNLVMQVRDDTVNENLMQIQKSVSELNPPKREASPGVKSTSEGPKPGDRFKQLKEQEVKRRQQREEETRKTEEAAAIATEVHEAGDKTAQVGNEDGDGVAVKSDAVTTDNDPSTSGIVVNGNPSSGDFGRHQKATSTLHTENKDSADFQFNERNEKSLEKETEVYPPAATDNKAPAEDPDQVRKD 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3165 532 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Alju02g3165 532 MobiDBLite consensus disorder prediction 481 509 - -
Alju02g3165 532 NCBIfam membrane protein insertase YidC 129 343 IPR028055 -
Alju02g3165 532 MobiDBLite consensus disorder prediction 391 427 - -
Alju02g3165 532 PANTHER OXA1 81 408 IPR001708 GO:0016020|GO:0032977
Alju02g3165 532 MobiDBLite consensus disorder prediction 368 532 - -
Alju02g3165 532 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
Alju02g3165 532 Coils Coil 400 420 - -
Alju02g3165 532 MobiDBLite consensus disorder prediction 453 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3165 Alju-ChrAlju02 48978379 48982565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3165 56 411 Chloroplast and Mitochondria Gene Families AT2G28800 55.249 1.08e-129 383