Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3147 ATGGTTTTTGCTGAAAGCTGTATGCAATTGGATTGTGTTTATGAATTTCTTTTTCCGACACCCCGCGACTTTTCTCCTTCTACATGTTTCTCTGCTGCCAAATTTAGTAAAACCAAGGCACTACTCATGGCTCCATCTAGAAAATCCAAAATTTTCACGAAGAGATATTCAAATATTCGTGAAGCTGTATCTAATGAAGATAAAAAAACAGAGAATGTTGGCAAGACTAGGCCACAGGGTAGTCCTGGAATTCAAAAGAAGAGAAAATTGGCTGACATGTTAGGACCACAATGGAGAAAGGAGGAGCTAGAGCGTTTCTATGAAGCTTACCGTAAATATGGGAAAGACTGGAAGAAGGTGGCTGCTGCAGTGCATAATAGATCTTTGGAAATGGTAGAAGCTCTGTACTCTATGAATCGAGCATACTTGTCTCTTCCAGAGGGCACTGCTTCTGTGGTTGGACTCATAGCAATGATGACAGATCACTATAGTGTACTGGGAGGAAGTGATAGTGGACAAGAAACCAATGAAGATACAGAAACATTTAGAAAGCCTCCAAAATATTTGCGGCAGAAACGTTCAGATGGCAACTATAAATCATTAGATGGACATTTTTCAGATCATTCTCAGTCACATTCAGTTATATCTGGTGATGGTTGTCTGTCATTGTTGAAGAAGAGTCATTCTGGAATAAGTTCTCATGCTGTTCGCAAAAGAACTCCCCGTGTCCCTGTTTCACATTCCATTCGTAAGGATGTTGGTGAAAAGCGTTTTTCACCTGCTAGGCAAGGTTACAGGCCAATGGTTGACGGTAATGATGTTGCTCATAAGATTGCATTAGCACTGACAGAGGCTTCACAAATAGGCGGCTCTTCCAAAGTTTCTGGCTCACCAAACAATAAATCTAAGGGCATTATGTCATCGCCTGGTCAGAATAATGGGAGGAAGAACACTAAATCAGCAGCAGCAGGATCCAAATTTTGCCATTCTGACTTGAATGAGGGTAGCTCTGAAATAAGTTTAGGAAGCAATGGGTGCGGCAGTGGAGATAATTCTCAAAAGCTAGGTCAATGGAGCAGCAGAGAAAGTGCTAGAAGAGGAAAAAATGAAGAAAAGGGACCAAAACACTACCGAAAAAAGTTAGAACTAAAAGAAAATGTGAATAAACATTTGGATGGTGTAAAGGAAGGTTCTAGTGGGACAGAAGAAGATGATGGACTGGATTTAATTAAGTGTAAAATTGACACTAATTTTGCAGAAACAAAAGGTGCCAGGTCCTCTTTCAAGAGTCTCAGGAAGAAAAGCAAAAAAGTACTGCTTGAAAAAAAGGATGAAGATCCTTCTTTTGATGCTCTGAAAGCCTTGGCTGATCTATCTTTGATGATGCCAGTCACCAACCCTGACACCAAGTCACCTGTTCGGGTGATGAAAGAAAACCAAGGAGTTGTTGATGAGTCTAAAGTGGAAATCGATCATGCAATTCTGAGTGATGAAAGCACTGCTTTAGCTAAATTGGGTTTGGTTTCTCCTGATAATGGAGTTCTTGTTCCTCAAGAAGAGGGCACCTTCCAACTTGATGCTAGAAAGAGGAAAAGAAGACAAACATCTTCAATACTGAAAGATACTGATGACATGGCAAAGTCTGTTGTTAAAGGCAAGCACCCTTCTGTTTCCACACAACAGTCAAGACAACTGAAGGTGGTACAATCCCCAGGAATGATGTCTTCAAGTAATGATGACAAAGGAGGGGATGATTCACTGCTGTTACCCCTAAAAGTTTCATCTACAGATGAAGTCGGTCTAGCAAACAAAGGAAGGCGTAGACGAAAGATGGAAAAACCAAAGCCAATGGTACAACAAGATATAAAGGTGTCAGAAAATTTTTTTAGTGGTCAACATAGAAAATCCATTCTCCAGAACAGTGTATCAAGCCACAAGGAGCTTATTCATTGCCTGTCTTCACATCAAATACGGCGATGGTGCACTTTTGAGTGGTTTTACAGTGCTATAGATTACCCATGGTTTGCAAAAAGGGAGTTCACGGAGTACTTGGAACATGTTGGATTGGGGCATGTTCCTAGACTGACTCGTATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGCAGACCCCGGAGATTTTCTAAGAAATTTTTGATAGAAGAGAAAACAAAGTTAAATCAATACCGGGACTCGGTTAGAGCACATTATGCAGAACTTCTTGCTGGTACCAGGGATGGCCTTCCAACTGATTTGGCCAGGCCTTTAATTGTTGGACAGCGTGTCATTGCTATTCACCCAAAGACGAGGGAGATTCATGATGGGAGTATACTAACTGTTGACAACTGTAGATGTCGGGTTCAGTTTGACCAGCCTGAACTGGGGGTTGAATTAGTCATGGATATTGACTGCATGCCTCAGAACCCATATGAAAATATGCCAGCTTCTCTGATAAGGCGCAATGTGATTCCTGCTAAACTAAATGGAAACCTTATTGAGTTCAAGCTTAACGGGAAACTGAGACAAGAAAAGATGGAGGAGAACGGAATATTGTCCCCTGGCGGAAACTTAGATCATGTTGATGCTCTTTATATATCCCCCTTAGCTCATGGCATCAACAATTTATTGAAACAGGGCATTTCGACAAGTTCCAAATTGCAAACAAATGTTGCTTGCAATGAGATTGGTAACGCTATACTGTCAGCAAATTCTAAAGCTTTTTTTCATGAAAATGTCCCATCCAAAGAAGCTGGCAGAAATGCTGTTTTTGAGCTGACTCGTGCTCTTGACAAAAAGGAAATTGTGCTGTCTGAACTGAAGCAAATGAATGATGAGGCATCTGAGAGACGGAAATATGGGGACCACTCTTTAAACGATTCAGAGCCATTTAAGAGGCATTATGCTGCAGTATTGTTGCAGTTAAATGAAGTGAACGAGCAGGTCTCTTCTGCCTTGTTTTGCATGAGACAGCATAACACATATCAGGGGAACTTCTCTAATTTATCACCAAGGCCCGCAGCTAATTCAGACGATCTTGGTGGTCAAGCTAGCTCTTCGTATTGTTCGGTTTCTCACAACCAAAATTGTCAATCTCATATAGCTGAAATTATTGAAAGTTCTAAAAGAAGAGCCTGCACAATGGTTGGTGCAGCTATGCAGGCGATGTTGTCTTTTACTAAGACAGAAGGTAAGGTTGAAGGAATTGAGGAGGCAATTAATTATATAAATAATCGGCTTTCAGTGGATGACCATGCTGCTCCATCCTCGCAATTCATGCCTACAGACTCTGTTCATGTTACTCTAGCTTCTCAGGATCAGATGATGACTGCAAGTAAATCGAATCCTTTTTCACAAGATCCTGAACTAAACAGCTCATCTGATCAAAATGAAGTGAAAATTCCCTCAGAACTTATTTCTCAATGTCTAGCTACATTGTTTATGATCCAGAAGTGCACAGAACGACATTTCCCACCTGCCGACGTTGTACACTTGCTAGATTCTGCAGTCACAAGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATCAGGAATCAGATATTGGCGCTCATACCTACCCAAACCACCTAG 3618 0.411 MVFAESCMQLDCVYEFLFPTPRDFSPSTCFSAAKFSKTKALLMAPSRKSKIFTKRYSNIREAVSNEDKKTENVGKTRPQGSPGIQKKRKLADMLGPQWRKEELERFYEAYRKYGKDWKKVAAAVHNRSLEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGQETNEDTETFRKPPKYLRQKRSDGNYKSLDGHFSDHSQSHSVISGDGCLSLLKKSHSGISSHAVRKRTPRVPVSHSIRKDVGEKRFSPARQGYRPMVDGNDVAHKIALALTEASQIGGSSKVSGSPNNKSKGIMSSPGQNNGRKNTKSAAAGSKFCHSDLNEGSSEISLGSNGCGSGDNSQKLGQWSSRESARRGKNEEKGPKHYRKKLELKENVNKHLDGVKEGSSGTEEDDGLDLIKCKIDTNFAETKGARSSFKSLRKKSKKVLLEKKDEDPSFDALKALADLSLMMPVTNPDTKSPVRVMKENQGVVDESKVEIDHAILSDESTALAKLGLVSPDNGVLVPQEEGTFQLDARKRKRRQTSSILKDTDDMAKSVVKGKHPSVSTQQSRQLKVVQSPGMMSSSNDDKGGDDSLLLPLKVSSTDEVGLANKGRRRRKMEKPKPMVQQDIKVSENFFSGQHRKSILQNSVSSHKELIHCLSSHQIRRWCTFEWFYSAIDYPWFAKREFTEYLEHVGLGHVPRLTRIEWGVIRSSLGRPRRFSKKFLIEEKTKLNQYRDSVRAHYAELLAGTRDGLPTDLARPLIVGQRVIAIHPKTREIHDGSILTVDNCRCRVQFDQPELGVELVMDIDCMPQNPYENMPASLIRRNVIPAKLNGNLIEFKLNGKLRQEKMEENGILSPGGNLDHVDALYISPLAHGINNLLKQGISTSSKLQTNVACNEIGNAILSANSKAFFHENVPSKEAGRNAVFELTRALDKKEIVLSELKQMNDEASERRKYGDHSLNDSEPFKRHYAAVLLQLNEVNEQVSSALFCMRQHNTYQGNFSNLSPRPAANSDDLGGQASSSYCSVSHNQNCQSHIAEIIESSKRRACTMVGAAMQAMLSFTKTEGKVEGIEEAINYINNRLSVDDHAAPSSQFMPTDSVHVTLASQDQMMTASKSNPFSQDPELNSSSDQNEVKIPSELISQCLATLFMIQKCTERHFPPADVVHLLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPTQTT 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3147 1205 Coils Coil 924 948 - -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 1107 1128 - -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 553 582 - -
Alju02g3147 1205 Gene3D - 30 150 - -
Alju02g3147 1205 SMART DIRP_2 666 767 IPR033471 -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 63 88 - -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 288 323 - -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 339 360 - -
Alju02g3147 1205 SMART sant 94 142 IPR001005 -
Alju02g3147 1205 Pfam Myb-like DNA-binding domain 97 132 IPR001005 -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 525 550 - -
Alju02g3147 1205 PANTHER LIN-9 43 1204 IPR010561 GO:0006351|GO:0017053
Alju02g3147 1205 MobiDBLite consensus disorder prediction 339 379 - -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 525 585 - -
Alju02g3147 1205 Pfam DIRP 665 766 IPR033471 -
Alju02g3147 1205 Pfam LIN9 C-terminal 921 989 IPR045831 -
Alju02g3147 1205 CDD SANT 98 132 IPR001005 -
Alju02g3147 1205 SUPERFAMILY Homeodomain-like 94 140 IPR009057 -
Alju02g3147 1205 MobiDBLite consensus disorder prediction 361 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3147 Alju-ChrAlju02 48581022 48596112 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g3147 DIRP 2.2e-29 No_clan