Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3144 ATGTCCACCTCTAGAACCCTAGATTCTTCTTCATCATCACCATCACCATCCTTCAAAGGCTATGAAGAAAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACATCTCCTTGTGGAGGTGAGAAAAGAGGAAGAAGAAAGCAATCAGAACCAGGAAGGTTTCTTGGTGTCAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATAAGGGACCCCACAACAAAAGAAAGGCATTGGCTTGGAACTTTTGACACTGCACAAGAAGCTGCTCTGGCTTATGACAGAGCGGCTCTGTCCATGAAAGGAAACCAAGCAAGAACAAATTTCATATACTCTGACACTAACAACACTACTTCTTTTCACACTCTTCTTTCTCCTTTAGATGTTCAAGCTCTTTTACCAACAACCTATCAGAGTAGTCCTAGTGTAGTATTATCTGATATGTCTCATCTTAATAACGCTTCTAATTCCATTTCCACCAACCTTCATCATCATCATCATCATCAGATTGAGCCTAATCTTCCTCCTACCCAGATGAACAATGACATGCCTGAAACTGAGAACTTTTTCTTGTTTCCCAGTGATTCTAACTCAGGATACTTGGAATGTGTGGTTCCTGATAACTGTCTCAGAAGGAACAATGAGAGTGCTTCAAATGACCAAAAGGGCCAATCTCATCATCAACAAGAAGACATCATCAAAATACCAACTGTGGGAAGTGAAAGTTCAGATTTTTCTTCATACCCAGATGAAATCTCTCAGGGACTGTCATGGGATTCGGATTTCAGTGAGCTTTCTGCTATTTTCAAGAGCAACAACACAATGAGGGTTGAAGAAGAAGATGCGTGCTGCTTTGGGAGTACTGGGATTAGTTCAAGCTATGGACTAATGACTGAACAATATGCTTCAGCTTCAGCTTCAGCTTCTTCTTCTTCATGTGCCTTTGGAGATGTTGATATGGGATATTCAATGTTCTGA 984 0.4126 MSTSRTLDSSSSSPSPSFKGYEENQTQMVLSLLQRNTSPCGGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGNQARTNFIYSDTNNTTSFHTLLSPLDVQALLPTTYQSSPSVVLSDMSHLNNASNSISTNLHHHHHHQIEPNLPPTQMNNDMPETENFFLFPSDSNSGYLECVVPDNCLRRNNESASNDQKGQSHHQQEDIIKIPTVGSESSDFSSYPDEISQGLSWDSDFSELSAIFKSNNTMRVEEEDACCFGSTGISSSYGLMTEQYASASASASSSSCAFGDVDMGYSMF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3144 327 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Alju02g3144 327 SUPERFAMILY DNA-binding domain 56 113 IPR016177 GO:0003677
Alju02g3144 327 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Alju02g3144 327 MobiDBLite consensus disorder prediction 1 27 - -
Alju02g3144 327 CDD AP2 55 111 IPR001471 GO:0003700|GO:0006355
Alju02g3144 327 FunFam Ethylene-responsive transcription factor 2 55 113 - -
Alju02g3144 327 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 40 246 - -
Alju02g3144 327 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Alju02g3144 327 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Alju02g3144 327 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Alju02g3144 327 Pfam AP2 domain 58 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3144 Alju-ChrAlju02 48537992 48538975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3144 1 320 AP2-EREBP Transcription Factor Family AT5G18560 36.504 1.33e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g3144 AP2 1.3e-12 CL0081