Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3143 ATGGCTGACCGATTTCCAGCTTCTTGTGAATTCCACCGCAAATCCATGTTCTTTGTGAAAGGTTTTACATCAGTTCGGTCACTCTATAATCTTTTTCAACATGTTTCATTATCAACCTTCGCTCCCATGTACAGCACAGCCGCATCTTCTACACCCACTTCAGAGAAAATGTCTTTCACAGTGAATTACCTCATTAGCAAATGTGGATTCTCCCGAGGAACCGCATCGGCGATTGCCCAGCGCGTCTCTCTCAAGTCGTCGGAAAAACCGGACTTCGTTCTCACCCTTTTCAGAAGCTGTGGTTTTACGAACTCGCAGATTCGCAATGTCGTCAAGAAAGCACCGAGATTGCTTCTGAGTGATCCTGGGAAGAGTATTTGGCCTAAGCTGGATTTCTTATTATCCAAAGGTGCGTCTTGCTCTCAACTTGTCGACGTTGTGACCAGATGCCCTCGATTCTTATTCAGAAGCTTAGAAAACCATTTAGTACCTAGTTATAATTTTGTTAAAGACTTTGTTGGATCTGATCAAAGGACTATCACCTCAATCACGCGTAGTCATAGAATAATTTGTTGTGATTTCCTAGAAACTAACATCAAACTCTTGCTTGACATTGGAGTGCCCAAATCTGGCATTGCTGCATTGCTTCATTCATGGCCTAGCTTGTTTACTATGAATTTAGATAAATTTAGAGTGGCAGTTGAGGGATTAAAGGATAGAGGTTTTGACCCTTCAAAATCAAAATTCATCCCTGCATTGTATGCCACAAATAAGTTAAGCAAATCGGTTTGGAATAGTAAGGTTGAATTCTTTAAGAAGTGGGGCTGGTCTGAAGAAGAGATTGATAAAGCCTTTGTACTGCATCCTTATTGTATGTTAAAATCTTTATCTAAGATTAAGGCAGTGATGGAGTTTTTTATGAATGAAATGGGTTGGGACTCCAGTTTGCTTGCGGGTAATCCCGTATTTTTTTCAATGAGTTTGGAGAGAAGACTCATTCCAAGGGCTTATGTCTTGCAATATATTCATTCAAGAGGTTTAATTAAGAATGCCTGTATCATATACCCTTATTATATTACTGAAAAGATATTCCTTGAGAAATATGTCATTCGTTTTGAGGATGAAGCTCCAGGATTATTGAAGTTGTATCAAGAGACAATGAATCGTTCAAGAAAAACTTGA 1182 0.3934 MADRFPASCEFHRKSMFFVKGFTSVRSLYNLFQHVSLSTFAPMYSTAASSTPTSEKMSFTVNYLISKCGFSRGTASAIAQRVSLKSSEKPDFVLTLFRSCGFTNSQIRNVVKKAPRLLLSDPGKSIWPKLDFLLSKGASCSQLVDVVTRCPRFLFRSLENHLVPSYNFVKDFVGSDQRTITSITRSHRIICCDFLETNIKLLLDIGVPKSGIAALLHSWPSLFTMNLDKFRVAVEGLKDRGFDPSKSKFIPALYATNKLSKSVWNSKVEFFKKWGWSEEEIDKAFVLHPYCMLKSLSKIKAVMEFFMNEMGWDSSLLAGNPVFFSMSLERRLIPRAYVLQYIHSRGLIKNACIIYPYYITEKIFLEKYVIRFEDEAPGLLKLYQETMNRSRKT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3143 393 Pfam mTERF 94 243 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 Pfam mTERF 259 352 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 Gene3D Transcription termination factor 3, mitochondrial 167 375 IPR038538 -
Alju02g3143 393 FunFam Mitochondrial transcription termination factor-like 158 376 - -
Alju02g3143 393 PANTHER CGI-12 PROTEIN-RELATED 57 371 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Alju02g3143 393 SMART mt_12 180 208 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3143 Alju-ChrAlju02 48510998 48512179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju02g3143 mTERF 4.2e-20 No_clan