Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3132 ATGTTTCGGCGGGCTATCCTTTCCCTGCTGTTGAAGCAATCTGTTTCTGTTTCTGGCAGAGCCACCATCTTTAATTCTTATCCTTTCTTGCATTCTCTCTCTCTTTCTCTGTCGTCCCCAAACAAGTGGGCATAATCACGACAATTCTATCCCACGCTTCTTTTCAGATCAGGAAATCCTTCCTCTTCCCCTTTCACTTCCCTCAGAGCCTTCCCTTTTCCCTCTCTTCCAAATCTCTTGGAAATGGAAGGTTCTGCTGACAATGAACGCCTTCACTTCGGCAAGATGGGATTCGGATGCAAGCATTATAGGAGAAGATGCATGATTCGAGCTCCTTGTTGCAATGAGATTTACTGGTGTCGTCATTGTCATAACGAGGCAGTGAGCATGTTGAGAAATATCTATGATCGGCATGAACTAGTCCGCCAAGATGTTGAACAAGTTGTTTGTGCAGTTTGTGACACAGAACAGCCGGTTGCTCAAGTTTGCACAAACTGTGGTGTCATGATGGGAGAATATTTCTGCGACATCTGCAAATTCTTTGATGATGATACTGGGAAACAAGAGTTTCATTGTGATGATTGTGGGATCTGTAGAGTTGGTGGCCGTCAGAATTATTATCATTGCAAGAAGTGCGGAACCTGTTATTCGGTTGCCCTGCGTGATAATCATTCTTGTGTAGAGAACTCTATGAGGCATCACTGTCCAATTTGTTATGAGTACCTTTTTGATTCATTGAAAGACACTACTGTAATGAAATGTGGTCACACAATGCATCATGAGTGTTACGAAGAGATGATAAATCGTGAAAAGTATTGTTGCCCCATATGCTCCAGGTCAGTGAAGGATATGTCTAGTACATGGAAGAGAATTGATGAAGAGATTCGAGAAACAGCCATGCCCGAAGATTATCGGGGCAGGAAGGTTTGGATACTATGCAATGACTGCAATGACACAACTGAAGTGTACTACAACATTATTGGGCAAAAATGCGGTCACTGCGGATCCTATAATACTCGCACAATTGCTCCTCCTGTTCTTCCTCAATGA 1050 0.4314 MFRRAILSLLLKQSVSVSGRATIFNSYPFLHSLSLSLSSPNKWAXSRQFYPTLLFRSGNPSSSPFTSLRAFPFPSLPNLLEMEGSADNERLHFGKMGFGCKHYRRRCMIRAPCCNEIYWCRHCHNEAVSMLRNIYDRHELVRQDVEQVVCAVCDTEQPVAQVCTNCGVMMGEYFCDICKFFDDDTGKQEFHCDDCGICRVGGRQNYYHCKKCGTCYSVALRDNHSCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHHECYEEMINREKYCCPICSRSVKDMSSTWKRIDEEIRETAMPEDYRGRKVWILCNDCNDTTEVYYNIIGQKCGHCGSYNTRTIAPPVLPQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3132 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 308 IPR013083 -
Alju02g3132 349 ProSiteProfiles Zinc finger CTCHY-type profile. 170 234 IPR017921 -
Alju02g3132 349 Pfam Zinc-ribbon 283 340 IPR039512 -
Alju02g3132 349 SUPERFAMILY Zinc hairpin stack 171 228 IPR037275 -
Alju02g3132 349 ProSiteProfiles Zinc finger RING-type profile. 235 278 IPR001841 -
Alju02g3132 349 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 89 346 - -
Alju02g3132 349 SMART ring_2 235 277 IPR001841 -
Alju02g3132 349 Gene3D - 309 344 - -
Alju02g3132 349 ProSiteProfiles Zinc finger CHY-type profile. 93 168 IPR008913 GO:0008270
Alju02g3132 349 Pfam CHY zinc finger 100 180 IPR008913 GO:0008270
Alju02g3132 349 CDD RING-H2_Pirh2-like 234 278 - -
Alju02g3132 349 SUPERFAMILY RING/U-box 234 284 - -
Alju02g3132 349 SUPERFAMILY CHY zinc finger-like 98 169 IPR037274 GO:0008270
Alju02g3132 349 Pfam Zinc finger, C3HC4 type (RING finger) 235 277 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3132 Alju-ChrAlju02 48396488 48400023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3132 95 348 C2H2 Transcription Factor Family AT3G18290 37.066 2.69e-52 184