Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3102 ATGACTGGCGGAGCGGAACTCAGAGCTCGGAGAGTCGACAAAATGGTGAAGTTTCTGAAGCCTAACAAGGCCGTGATCCTCCTTCAAGGGCGTTATGCCGGTCGCAAGGCCGTGATTGTGCGCACTTTCGATGACGGCACTCGCGACCGCGCATACGGCCACTGCTTGGTCGCCGGGATTAAGAAATATCCCAGTAAAGTCATCAAGGATTCCGCCAAGAAGACGGCGAAGAAGTCTAGGGTTAAGGCCTTCGTCAAGCTCGTGAACTACCAGCACCTCATGCCTACGCGTTACACCCTCGATGTGGATCTGAAGGATGTAGTGACGATCGATTCTCTTCAATCGAAGGACAAGAAGGTGACTGCCTTGAAGGAGACTAAGAAGAGGTTTGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTCACCAAGCTTAGGTTTTGA 447 0.5213 MTGGAELRARRVDKMVKFLKPNKAVILLQGRYAGRKAVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3102 148 CDD KOW_RPL27 20 101 IPR041991 -
Alju02g3102 148 ProSitePatterns Ribosomal protein L27e signature. 137 148 IPR018262 GO:0003735|GO:0005840|GO:0006412
Alju02g3102 148 Coils Coil 113 133 - -
Alju02g3102 148 SUPERFAMILY Translation proteins SH3-like domain 16 148 IPR008991 -
Alju02g3102 148 Pfam Ribosomal L27e protein family 69 148 IPR001141 GO:0003735|GO:0005840|GO:0006412
Alju02g3102 148 FunFam 60S ribosomal protein L27 15 148 - -
Alju02g3102 148 Gene3D - 15 148 IPR038655 -
Alju02g3102 148 PANTHER 60S RIBOSOMAL PROTEIN L27 15 148 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3102 Alju-ChrAlju02 48005554 48008265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3102 15 148 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.185 4.45e-82 236